Parental gene:

MMD, ENSDNOG00000017248

Aliases:None
Description:monocyte to macrophage differentiation-associated [Source:HGNC Symbol;Acc:7153]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_1691:1087..24799(-)


>ENSDNOG00000017248
ATGCGGATCTTCATGAACCATCGGGCCCCAGCCAATGGCCGTTACAAACCAACTTGCTATGAACATGCTGCTAACTGTTA
CACACATGCATTCCTCATTGTTCCGGCCATTGTGGGCAGTGCCCTCCTCCATCGACTGTCTGATGATTGCTGGGAAAAGA
TAACAGCATGGATTTATGGAATGGGCCTCTGTGCCCTCTTCATCGTTTCTACCATATTTCACACTGTATCATGGAAAAAG
AGCCACTTAAGGACAGTGGAACATTGTTTTCACATGTGTGATAGAATGGTTATCTACTTCTTCATTGCTGCTTCTTATGC
GCCATGGTTAAATCTCCGTGAACTTGGACCCCTGGCATCTCATATGCGTTGGTTTATCTGGCTCATGGCAGCTGGAGGAA
CCATTTATGTATTTCTCTACCATGAAAAGTATAAGGTGGTTGAGCTATTTTTCTATCTCACAATGGGATTTTCTCCAGCC
TTGGTGGTGACATCAATGAATAACACCGATGGACTTCACGAACTTGCCTGTGGGGGTTTAATTTATTGCTTGGGAGTTGT
GTTCTTCAAGAGTGATGGCATCATTCCATTCGCCCATGCCATCTGGCATCTCTTTGTGGCCACGGCAGCTGCAGTGCATT
ACTACGCCATTTGGAAATATCTTTACCGAAGTCCTACAGACTTTATGCGACATTTATGA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 1 .56 RPM
SRP012922_cerebellum 9 .49 RPM
SRP012922_heart 1 .62 RPM
SRP012922_kidney 0 .00 RPM
SRP012922_liver 0 .00 RPM
SRP012922_lung 14 .36 RPM
SRP012922_quadricep_muscle 0 .87 RPM
SRP012922_spleen 6 .52 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000000205 ortholog_one2one 1 retrogene
retro_btau_777,
Choloepus hoffmanni ENSCHOG00000013437 ortholog_one2one 1 retrogene
retro_chof_1814,
Macropus eugenii ENSMEUG00000007054 ortholog_one2one 1 retrogene
retro_meug_714,
Myotis lucifugus ENSMLUG00000012876 ortholog_one2many 1 retrogene
retro_mluc_289,
Monodelphis domestica ENSMODG00000014847 ortholog_one2one 5 retrogenes
retro_mdom_1029, retro_mdom_1569, retro_mdom_1591, retro_mdom_670, retro_mdom_951,
Oryctolagus cuniculus ENSOCUG00000010549 ortholog_one2many 1 retrogene
retro_ocun_222,
Otolemur garnettii ENSOGAG00000005902 ortholog_one2one 2 retrogenes
retro_ogar_3070, retro_ogar_3071,
Procavia capensis ENSPCAG00000004969 ortholog_one2one 1 retrogene
retro_pcap_231,
Ictidomys tridecemlineatus ENSSTOG00000016227 ortholog_one2one 1 retrogene
retro_itri_913,
Tursiops truncatus ENSTTRG00000007915 ortholog_one2one 1 retrogene
retro_ttru_469,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_2313 94.70 56.90
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Download FASTA sequences of all ENSDNOG00000017248 retrocopies