Parental gene: | MMD, ENSMODG00000014847 |
| Aliases: | None |
| Description: | monocyte to macrophage differentiation-associated [Source:HGNC Symbol;Acc:7153] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 2:178246116..178273854(+) |
>ENSMODG00000014847
ATGCGGTTCAAGAGCCGATTCCAGCGGTTCATGAACCATCGGGCCCCAGCCAACAGCCGCTATAAACCTACCTGTTATGA
GCATGCAGCTAACTGCTACACACATGCACTCCTCATTGTTCCTGCTATCGTGGGCAGTGCCCTCCTCCATCGACTATCGG
ATGACTGTTGGGAAAAGATCACAGCATGGATTTATGGAATGGGCCTATGTGCCCTCTTCATAGTTTCCACAGTATTTCAC
ATTGTTTCATGGAAAAAGAGTCACTTAAGGACAATGGAGCATTGTTTTCATATGTGCGATAGAATGGTGATCTATTTCTT
CATTGCAGCCTCCTATGCGCCATGGTTAAATCTCCGTGAACTTGGACCCCTGGCATCTCATATGCGTTGGTTTATCTGGC
TCATGGCAGCTGGAGGAACCATTTATGTATTTCTCTACCATGAAAAGTATAAAGTGGTCGAGCTATTTTTCTATCTAACA
ATGGGATTTTCTCCTGCATTGGTAGTAACCTCAATGAATAACACTGATGGGCTACAAGAACTTGCCTACGGAGGCATAAT
TTATTGCTTAGGAGTCGTGTTCTTCAAAAGTGATGGCATCATTCCATTCGCCCATGCCATTTGGCACCTTTTTGTGGCCA
CAGCAGCAGCAGTACATTACTATGCCATTTGGAAATACCTTTACCGAAGTCCTACAGACTTTATCCGACACTTATGA
ATGCGGTTCAAGAGCCGATTCCAGCGGTTCATGAACCATCGGGCCCCAGCCAACAGCCGCTATAAACCTACCTGTTATGA
GCATGCAGCTAACTGCTACACACATGCACTCCTCATTGTTCCTGCTATCGTGGGCAGTGCCCTCCTCCATCGACTATCGG
ATGACTGTTGGGAAAAGATCACAGCATGGATTTATGGAATGGGCCTATGTGCCCTCTTCATAGTTTCCACAGTATTTCAC
ATTGTTTCATGGAAAAAGAGTCACTTAAGGACAATGGAGCATTGTTTTCATATGTGCGATAGAATGGTGATCTATTTCTT
CATTGCAGCCTCCTATGCGCCATGGTTAAATCTCCGTGAACTTGGACCCCTGGCATCTCATATGCGTTGGTTTATCTGGC
TCATGGCAGCTGGAGGAACCATTTATGTATTTCTCTACCATGAAAAGTATAAAGTGGTCGAGCTATTTTTCTATCTAACA
ATGGGATTTTCTCCTGCATTGGTAGTAACCTCAATGAATAACACTGATGGGCTACAAGAACTTGCCTACGGAGGCATAAT
TTATTGCTTAGGAGTCGTGTTCTTCAAAAGTGATGGCATCATTCCATTCGCCCATGCCATTTGGCACCTTTTTGTGGCCA
CAGCAGCAGCAGTACATTACTATGCCATTTGGAAATACCTTTACCGAAGTCCTACAGACTTTATCCGACACTTATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000000205 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000013437 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000017248 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000007054 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000012876 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000010549 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000005902 | ortholog_one2one | 2 retrogenes | |
| Procavia capensis | ENSPCAG00000004969 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000016227 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000007915 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_670 | 81.05 | 78.57 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mdom_951 | 75.00 | 76.89 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mdom_1029 | 77.52 | 53.36 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mdom_1569 | 78.06 | 64.71 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mdom_1591 | 78.67 | 61.76 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000014847 retrocopies