Parental gene: | ISCA1, ENSG00000135070 |
| Aliases: | ISCA1, HBLD2, ISA1, hIscA |
| Description: | iron-sulfur cluster assembly 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:28660] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 9:88879460..88897676(-) |
>ENSG00000135070
ATGTCGGCTTCCTTAGTCCGGGCAACTGTCCGGGCTGTGAGCAAGAGGAAGCTGCAGCCCACCCGGGCAGCCCTCACCCT
GACACCTTCAGCAGTAAACAAGATAAAACAACTTCTTAAAGATAAGCCTGAGCATGTAGGTGTAAAAGTTGGTGTCCGAA
CCAGGGGCTGTAATGGCCTTTCTTATACTCTAGAATATACAAAGACAAAAGGAGATTCTGATGAAGAAGTTATTCAAGAT
GGAGTCAGAGTATTCATCGAAAAGAAAGCACAGCTAACACTTTTAGGAACAGAAATGGACTATGTTGAAGACAAATTATC
CAGTGAGTTTGTGTTCAATAACCCAAACATCAAAGGGACTTGTGGCTGTGGAGAAAGCTTTAATATTTGA
ATGTCGGCTTCCTTAGTCCGGGCAACTGTCCGGGCTGTGAGCAAGAGGAAGCTGCAGCCCACCCGGGCAGCCCTCACCCT
GACACCTTCAGCAGTAAACAAGATAAAACAACTTCTTAAAGATAAGCCTGAGCATGTAGGTGTAAAAGTTGGTGTCCGAA
CCAGGGGCTGTAATGGCCTTTCTTATACTCTAGAATATACAAAGACAAAAGGAGATTCTGATGAAGAAGTTATTCAAGAT
GGAGTCAGAGTATTCATCGAAAAGAAAGCACAGCTAACACTTTTAGGAACAGAAATGGACTATGTTGAAGACAAATTATC
CAGTGAGTTTGTGTTCAATAACCCAAACATCAAAGGGACTTGTGGCTGTGGAGAAAGCTTTAATATTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 27 .76 RPM |
| bodymap2_lung | 22 .89 RPM |
| bodymap2_breast | 61 .62 RPM |
| bodymap2_adipose | 28 .35 RPM |
| bodymap2_adrenal | 32 .44 RPM |
| bodymap2_skeletal_muscle | 22 .43 RPM |
| bodymap2_thyroid | 46 .34 RPM |
| bodymap2_prostate | 47 .47 RPM |
| bodymap2_colon | 34 .65 RPM |
| bodymap2_testis | 41 .99 RPM |
| bodymap2_brain | 59 .44 RPM |
| bodymap2_heart | 78 .57 RPM |
| bodymap2_white_blood_cells | 32 .48 RPM |
| bodymap2_lymph_node | 33 .50 RPM |
| bodymap2_ovary | 30 .11 RPM |
| bodymap2_kidney | 62 .15 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000046526 | possible_ortholog | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000001940 | ortholog_one2one | 6 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000010652 | possible_ortholog | 5 retrogenes | |
| Echinops telfairi | ENSETEG00000016537 | possible_ortholog | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000007518 | ortholog_one2many | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000003399 | ortholog_one2one | 3 retrogenes | |
| Monodelphis domestica | ENSMODG00000003559 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000044792 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000019339 | ortholog_one2one | 5 retrogenes | |
| Pan troglodytes | ENSPTRG00000021075 | ortholog_one2one | 7 retrogenes | |
| Rattus norvegicus | ENSRNOG00000018343 | ortholog_one2one | 4 retrogenes | |
| Tarsius syrichta | ENSTSYG00000012826 | possible_ortholog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_317 | 90.35 | 64.77 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_1556 | 72.66 | 77.84 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_1768 | 78.21 | 86.93 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_hsap_1975 | 87.66 | 86.93 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_hsap_2314 | 94.19 | 88.07 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_hsap_3329 | 94.97 | 90.34 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000135070 retrocopies