Parental gene:

ISCA1, ENSMMUG00000003399

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:15:94834076..94850451(-)


>ENSMMUG00000003399
ATGTCGGCTTCCTTAGTCCGGGCAACTGTCCGGGCTGTGAGCAAGAGGAAGCTGCAGCCCACCCGGGCAGCCCTCACTCT
GACACCTTCAGCAGTAAACAAGATAAAACAACTTCTTAAAGATAAGCCTGAGCATGTAGGTGTAAAAGTTGGTGTCCGAA
CCAGGGGCTGTAACGGCCTTTCTTATACTCTAGAATATACAAAGACAAAAGGAGATTCTGATGAAGAAGTTATTCAAGAT
GGAGTCAGAGTATTCATCGAAAAGAAAGCACAGCTAACACTTTTAGGAACAGAAATGGACTATGTTGAAGACAAATTATC
CAGTGAGTTTGTGTTCAATAACCCAAACATCAAAGGGACTTGTGGCTGTGGAGAAAGCTTTAATATTTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 82 .50 RPM
SRP007412_brain 97 .93 RPM
SRP007412_cerebellum 76 .20 RPM
SRP007412_heart 49 .52 RPM
SRP007412_kidney 49 .29 RPM
SRP007412_liver 16 .51 RPM
SRP007412_testis 53 .15 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000046526 possible_ortholog 2 retrogenes
retro_btau_1787, retro_btau_506,
Callithrix jacchus ENSCJAG00000001940 ortholog_one2one 6 retrogenes
retro_cjac_1623, retro_cjac_1734, retro_cjac_1870, retro_cjac_2608, retro_cjac_350, retro_cjac_672,
Dasypus novemcinctus ENSDNOG00000010652 possible_ortholog 5 retrogenes
retro_dnov_1162, retro_dnov_142, retro_dnov_1956, retro_dnov_431, retro_dnov_95,
Echinops telfairi ENSETEG00000016537 possible_ortholog 1 retrogene
retro_etel_1857,
Homo sapiens ENSG00000135070 ortholog_one2one 6 retrogenes
retro_hsap_1556, retro_hsap_1768, retro_hsap_1975, retro_hsap_2314, retro_hsap_317, retro_hsap_3329,
Gorilla gorilla ENSGGOG00000007518 ortholog_one2many 2 retrogenes
retro_ggor_1182, retro_ggor_92,
Monodelphis domestica ENSMODG00000003559 ortholog_one2one 1 retrogene
retro_mdom_583,
Mus musculus ENSMUSG00000044792 ortholog_one2many 1 retrogene
retro_mmus_278,
Pongo abelii ENSPPYG00000019339 ortholog_one2one 5 retrogenes
retro_pabe_1287, retro_pabe_2043, retro_pabe_2744, retro_pabe_2745, retro_pabe_367,
Pan troglodytes ENSPTRG00000021075 ortholog_one2one 7 retrogenes
retro_ptro_1047, retro_ptro_1185, retro_ptro_1316, retro_ptro_1689, retro_ptro_2149, retro_ptro_256, retro_ptro_2842,
Rattus norvegicus ENSRNOG00000018343 ortholog_one2one 4 retrogenes
retro_rnor_1177, retro_rnor_1805, retro_rnor_2254, retro_rnor_2956,
Tarsius syrichta ENSTSYG00000012826 possible_ortholog 2 retrogenes
retro_tsyr_1060, retro_tsyr_1698,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1230 70.08 96.12
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2. retro_mmul_1365 83.85 99.22
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3. retro_mmul_2211 79.84 98.45
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Download FASTA sequences of all ENSMMUG00000003399 retrocopies