Parental gene:

ENSGGOG00000015038

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:3:40472622..40477610(+)


>ENSGGOG00000015038
TTTAAGGGTGTACCCCACTTAACTCAATGGAATGAAAAGGATGTCCTTAAGTTCCTTGCAGCAGGAACCCACTTAGGTGG
CACCAATCTTGACTTCCAGATGGAACAGTACATCTATAAAAGGAAAAGTGATGGCATCTATATCATAAATCTGAAGAGGA
CCTGGGAGAAGCTTCTGCTGGCAGCTCGTGCTATTGTTGCCATTGAAAACCCTGCTGATGTCAGTGTTATATCCTCCAGG
AATACTGGCCAGAGGGCTGTGCTGAAGTTTGCTGCTGCCACTGGAGCCACTCCAATTGCTGGCCGCTTCACTCCTGGAAC
CTTCACTAACCAGATCCAGGCAGCCTTCCGGGAGCCACGGCTTCTTGTGGTCACTGACCCCAGGGCTGACCACCAGCCTC
TCACGGAGGCATCTTATGTTAACCTACCTACCATTGCGCTGTGTAACACAGATTCTCCTCTGCGCTATGTGGACATTGCC
ATCCCATGCAACAACAAGGGAGCTCACTCAGTGGGTTTGATGTGGTGGATGCTGGCTCGGGAAGTTCTGCGCATGCGTGG
CACCATTTCCCGTGAACACCCATGGGAGGTCATGCCTGATCTGTACTTCTACAGAGATCCTGAAGAGATTGAAAAAGAAG
AGCAGGCTGCTGCTGAGAAGGCAGTGACCAAGGAGGAATTTCAGGGTGAATGGACTGCTCCCGCTCCTGAGTTCACTGCT
ACTCAGCCTGAGGTTGCAGACTGGTCTGAAGGTGTACAGGTGCCCTCTGTGCCTATTCAGCAATTCCCTACTGAAGACTG
GAGCGCTCAGCCTGCCACGGAAGACTGGTCTGCGGCTCCCACTGCTCAGGCCACTGAATGGGTAGGAGCAACCACTGACT
GGTCTTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 76 .20 RPM
SRP007412_cerebellum 59 .06 RPM
SRP007412_heart 52 .85 RPM
SRP007412_kidney 157 .14 RPM
SRP007412_liver 261 .04 RPM
SRP007412_testis 90 .24 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000004183 possible_ortholog 1 retrogene
Ailuropoda melanoleuca ENSAMEG00000008962 possible_ortholog 13 retrogenes
Bos taurus ENSBTAG00000009757 possible_ortholog 19 retrogenes
Canis familiaris ENSCAFG00000005101 possible_ortholog 27 retrogenes
Dasypus novemcinctus ENSDNOG00000004048 possible_ortholog 27 retrogenes
Dipodomys ordii ENSDORG00000008267 possible_ortholog 1 retrogene
Equus caballus ENSECAG00000013062 possible_ortholog 5 retrogenes
Echinops telfairi ENSETEG00000018160 possible_ortholog 4 retrogenes
Felis catus ENSFCAG00000002739 possible_ortholog 22 retrogenes
Loxodonta africana ENSLAFG00000032009 possible_ortholog 5 retrogenes
Macropus eugenii ENSMEUG00000008169 possible_ortholog 14 retrogenes
Microcebus murinus ENSMICG00000004518 possible_ortholog 32 retrogenes
Monodelphis domestica ENSMODG00000010967 possible_ortholog 2 retrogenes
Mustela putorius furo ENSMPUG00000002463 possible_ortholog 21 retrogenes
Mus musculus ENSMUSG00000032518 possible_ortholog 1 retrogene
Ochotona princeps ENSOPRG00000004505 possible_ortholog 16 retrogenes
Pteropus vampyrus ENSPVAG00000007794 possible_ortholog 19 retrogenes
Rattus norvegicus ENSRNOG00000018645 possible_ortholog 27 retrogenes
Sarcophilus harrisii ENSSHAG00000006896 possible_ortholog 2 retrogenes
Tupaia belangeri ENSTBEG00000015946 possible_ortholog 54 retrogenes
Tursiops truncatus ENSTTRG00000014496 possible_ortholog 24 retrogenes
Vicugna pacos ENSVPAG00000012307 possible_ortholog 4 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_62 95.07 96.27
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2. retro_ggor_1069 94.35 95.93
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3. retro_ggor_1095 70.73 96.61
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4. retro_ggor_1110 92.83 99.32
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5. retro_ggor_1277 90.78 99.32
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6. retro_ggor_1729 76.76 96.27
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7. retro_ggor_2325 83.67 99.32
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8. retro_ggor_2461 88.93 88.47
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9. retro_ggor_2671 94.70 95.93
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10. retro_ggor_2804 94.70 95.93
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11. retro_ggor_2811 90.14 95.93
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Download FASTA sequences of all ENSGGOG00000015038 retrocopies