Parental gene:

ENSSHAG00000006896

Aliases:None
Description:None
Organism:Tasmanian devil (Sarcophilus harrisii)
Coordinates:GL861690.1:268183..274140(+)


>ENSSHAG00000006896
ATGTCCGGAGCCCTAGATGTCTTGCAGATGAAGGAGGAGGATGTCCTCAAATTCCTTGCTGCAGGGACCCATTTGGGCGG
CACCAATTTGGACTTCCAGATGGAACAGTATATCTACAAAAGAAAAAGCGATGGCATCTACATCATTAATTTGAAGAGAA
CTTGGGAAAAGCTTCTGCTGGCTGCTCGTGCCATTGTAGCCATTGAAAATCCGGCTGATGTTAGTGTCATCTCATCCAGG
AACACTGGCCAGAGAGCTGTCCTGAAATTTGCTGCTGCCACTGGCGCTACCCCTATTGCTGGACGATTCACCCCGGGCAC
CTTCACTAACCAGATCCAAGCAGCTTTCAGGGAGCCTCGCCTCTTGGTGGTCACTGATCCTCGGGCAGATCATCAGCCTC
TGACTGAAGCATCGTATGTGAACCTCCCGACCATTGCCTTGTGCAACACGGATTCCCCACTTCGCTACGTGGACATTGCC
ATTCCCTGTAACAACAAGGGAGCTCACTCTGTGGGGCTGATGTGGTGGATGCTGGCCCGGGAAGTTCTACGCATGCGCGG
CACCATTTCCCGCGAGCACCCATGGGAGGTTATGCCTGATCTCTACTTCTACCGGGATCCAGAGGAGATTGAAAAGGAGG
AACAGGCCGCTGCCGAGAAGGCGGTGACCAAGGAGGAGTTCCAGGGGGAATGGACTGCCCCTGCCCCAGAATTCACAGCT
ACGCAGCCGGAGGTGGCTGACTGGTCCGAAGGAGTGCAGGTGCCCTCGGTGCCCATCCAGCAGTTCCCTACTGAAGACTG
GAGTGCTCAGCCCGCTACTGAGGACTGGTCAGCAGCCCCTACTGCTCAGGCTACCGAGTGGGTAGGAACCACCACCGAGT
GGTCTTAA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000004183 possible_ortholog 1 retrogene
retro_acar_140,
Ailuropoda melanoleuca ENSAMEG00000008962 ortholog_one2one 13 retrogenes
retro_amel_1091, retro_amel_1276, retro_amel_1357, retro_amel_1432, retro_amel_1446, retro_amel_1497, retro_amel_1634, retro_amel_1817, retro_amel_1857, retro_amel_196, retro_amel_430, retro_amel_808, retro_amel_943,
Canis familiaris ENSCAFG00000005101 ortholog_one2one 27 retrogenes
retro_cfam_1046, retro_cfam_1109, retro_cfam_1173, retro_cfam_1189, retro_cfam_1263, retro_cfam_1288, retro_cfam_1366, retro_cfam_1373, retro_cfam_1435, retro_cfam_1511, retro_cfam_1534, retro_cfam_1545, retro_cfam_1555, retro_cfam_1679, retro_cfam_1770, retro_cfam_1814, retro_cfam_1957, retro_cfam_1990, retro_cfam_2140, retro_cfam_512, retro_cfam_820, retro_cfam_828, retro_cfam_854, retro_cfam_928, retro_cfam_957, retro_cfam_980, retro_cfam_994,
Callithrix jacchus ENSCJAG00000009675 possible_ortholog 15 retrogenes
retro_cjac_1113, retro_cjac_1572, retro_cjac_1595, retro_cjac_2265, retro_cjac_2438, retro_cjac_2500, retro_cjac_2502, retro_cjac_2750, retro_cjac_2897, retro_cjac_305, retro_cjac_3160, retro_cjac_4124, retro_cjac_53, retro_cjac_732, retro_cjac_958,
Cavia porcellus ENSCPOG00000008715 possible_ortholog 7 retrogenes
retro_cpor_1206, retro_cpor_1255, retro_cpor_1293, retro_cpor_594, retro_cpor_624, retro_cpor_806, retro_cpor_958,
Dasypus novemcinctus ENSDNOG00000004048 possible_ortholog 27 retrogenes
retro_dnov_1022, retro_dnov_108, retro_dnov_1099, retro_dnov_1219, retro_dnov_1372, retro_dnov_1431, retro_dnov_1614, retro_dnov_184, retro_dnov_1913, retro_dnov_1974, retro_dnov_1987, retro_dnov_1988, retro_dnov_2067, retro_dnov_2200, retro_dnov_2224, retro_dnov_2309, retro_dnov_2339, retro_dnov_2469, retro_dnov_2480, retro_dnov_375, retro_dnov_42, retro_dnov_456, retro_dnov_465, retro_dnov_663, retro_dnov_800, retro_dnov_895, retro_dnov_940,
Dipodomys ordii ENSDORG00000008267 ortholog_one2one 1 retrogene
retro_dord_548,
Equus caballus ENSECAG00000013062 ortholog_one2many 5 retrogenes
retro_ecab_193, retro_ecab_453, retro_ecab_46, retro_ecab_592, retro_ecab_71,
Erinaceus europaeus ENSEEUG00000005292 possible_ortholog 2 retrogenes
retro_eeur_202, retro_eeur_679,
Echinops telfairi ENSETEG00000018160 possible_ortholog 4 retrogenes
retro_etel_1399, retro_etel_1665, retro_etel_1960, retro_etel_92,
Felis catus ENSFCAG00000002739 ortholog_one2one 22 retrogenes
retro_fcat_1119, retro_fcat_1127, retro_fcat_1239, retro_fcat_1353, retro_fcat_1595, retro_fcat_1668, retro_fcat_1694, retro_fcat_1720, retro_fcat_1758, retro_fcat_1804, retro_fcat_1807, retro_fcat_1861, retro_fcat_1970, retro_fcat_239, retro_fcat_258, retro_fcat_384, retro_fcat_391, retro_fcat_551, retro_fcat_682, retro_fcat_722, retro_fcat_793, retro_fcat_906,
Homo sapiens ENSG00000168028 possible_ortholog 2 retrogenes
retro_hsap_107, retro_hsap_3015,
Gorilla gorilla ENSGGOG00000015038 possible_ortholog 11 retrogenes
retro_ggor_1069, retro_ggor_1095, retro_ggor_1110, retro_ggor_1277, retro_ggor_1729, retro_ggor_2325, retro_ggor_2461, retro_ggor_2671, retro_ggor_2804, retro_ggor_2811, retro_ggor_62,
Loxodonta africana ENSLAFG00000032009 possible_ortholog 5 retrogenes
retro_lafr_1234, retro_lafr_367, retro_lafr_806, retro_lafr_863, retro_lafr_997,
Microcebus murinus ENSMICG00000004518 ortholog_one2one 32 retrogenes
retro_mmur_1031, retro_mmur_1042, retro_mmur_1120, retro_mmur_1310, retro_mmur_1357, retro_mmur_136, retro_mmur_1432, retro_mmur_1482, retro_mmur_1513, retro_mmur_1522, retro_mmur_1593, retro_mmur_1596, retro_mmur_1607, retro_mmur_1628, retro_mmur_196, retro_mmur_219, retro_mmur_284, retro_mmur_302, retro_mmur_367, retro_mmur_477, retro_mmur_522, retro_mmur_532, retro_mmur_559, retro_mmur_561, retro_mmur_604, retro_mmur_620, retro_mmur_714, retro_mmur_727, retro_mmur_753, retro_mmur_756, retro_mmur_821, retro_mmur_933,
Macaca mulatta ENSMMUG00000007930 possible_ortholog 2 retrogenes
retro_mmul_1789, retro_mmul_592,
Macaca mulatta ENSMMUG00000022965 possible_ortholog 19 retrogenes
retro_mmul_1008, retro_mmul_1167, retro_mmul_120, retro_mmul_1237, retro_mmul_136, retro_mmul_1527, retro_mmul_1678, retro_mmul_1755, retro_mmul_1879, retro_mmul_1909, retro_mmul_2274, retro_mmul_2388, retro_mmul_2538, retro_mmul_2541, retro_mmul_2622, retro_mmul_378, retro_mmul_789, retro_mmul_876, retro_mmul_911,
Monodelphis domestica ENSMODG00000010967 ortholog_one2one 2 retrogenes
retro_mdom_1244, retro_mdom_1726,
Mustela putorius furo ENSMPUG00000002463 possible_ortholog 21 retrogenes
retro_mputfur_1045, retro_mputfur_1143, retro_mputfur_1194, retro_mputfur_1227, retro_mputfur_1311, retro_mputfur_1318, retro_mputfur_1427, retro_mputfur_1502, retro_mputfur_1558, retro_mputfur_1584, retro_mputfur_288, retro_mputfur_358, retro_mputfur_423, retro_mputfur_477, retro_mputfur_515, retro_mputfur_560, retro_mputfur_576, retro_mputfur_712, retro_mputfur_733, retro_mputfur_932, retro_mputfur_953,
Mus musculus ENSMUSG00000032518 possible_ortholog 1 retrogene
retro_mmus_219,
Otolemur garnettii ENSOGAG00000028830 possible_ortholog 8 retrogenes
retro_ogar_1507, retro_ogar_1548, retro_ogar_2094, retro_ogar_2258, retro_ogar_3126, retro_ogar_327, retro_ogar_457, retro_ogar_567,
Ochotona princeps ENSOPRG00000004505 ortholog_one2one 16 retrogenes
retro_opri_1083, retro_opri_1167, retro_opri_207, retro_opri_223, retro_opri_281, retro_opri_32, retro_opri_362, retro_opri_423, retro_opri_475, retro_opri_483, retro_opri_491, retro_opri_510, retro_opri_518, retro_opri_635, retro_opri_772, retro_opri_874,
Pongo abelii ENSPPYG00000013993 possible_ortholog 4 retrogenes
retro_pabe_1085, retro_pabe_1142, retro_pabe_116, retro_pabe_818,
Pan troglodytes ENSPTRG00000022841 possible_ortholog 1 retrogene
retro_ptro_14,
Pteropus vampyrus ENSPVAG00000007794 possible_ortholog 19 retrogenes
retro_pvam_1189, retro_pvam_1249, retro_pvam_1335, retro_pvam_1403, retro_pvam_1406, retro_pvam_1443, retro_pvam_1446, retro_pvam_396, retro_pvam_499, retro_pvam_532, retro_pvam_548, retro_pvam_60, retro_pvam_635, retro_pvam_650, retro_pvam_789, retro_pvam_889, retro_pvam_896, retro_pvam_898, retro_pvam_98,
Rattus norvegicus ENSRNOG00000018645 possible_ortholog 27 retrogenes
retro_rnor_1004, retro_rnor_1114, retro_rnor_1119, retro_rnor_1213, retro_rnor_1301, retro_rnor_1396, retro_rnor_1481, retro_rnor_1634, retro_rnor_1778, retro_rnor_1840, retro_rnor_1886, retro_rnor_2068, retro_rnor_2153, retro_rnor_2329, retro_rnor_2384, retro_rnor_2444, retro_rnor_2553, retro_rnor_2554, retro_rnor_2589, retro_rnor_2637, retro_rnor_2649, retro_rnor_2701, retro_rnor_2810, retro_rnor_2912, retro_rnor_2958, retro_rnor_645, retro_rnor_702,
Sus scrofa ENSSSCG00000011266 possible_ortholog 9 retrogenes
retro_sscr_1022, retro_sscr_1180, retro_sscr_22, retro_sscr_269, retro_sscr_890, retro_sscr_926, retro_sscr_966, retro_sscr_967, retro_sscr_982,
Tarsius syrichta ENSTSYG00000004458 possible_ortholog 6 retrogenes
retro_tsyr_115, retro_tsyr_1290, retro_tsyr_156, retro_tsyr_38, retro_tsyr_456, retro_tsyr_807,
Vicugna pacos ENSVPAG00000012307 possible_ortholog 4 retrogenes
retro_vpac_22, retro_vpac_293, retro_vpac_440, retro_vpac_553,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_shar_231 64.04 59.66
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_shar_484 77.54 62.71
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSSHAG00000006896 retrocopies