RetrogeneDB ID: | retro_tbel_1319 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_4389:697274..697821(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000015946 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 84.41 % |
Parental protein coverage: | 62.37 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDG-IYIINLKRTWEKLLLAARAIVAIE |
MS.ALDVLQMKEEDVL.FLAAGTHLGG.NLDFQMEQYI.KRKSD..I.IINLKR.WEKLLLAA.AIVA.E | |
Retrocopy | MSSALDVLQMKEEDVLTFLAAGTHLGGANLDFQMEQYIHKRKSDA<ISIINLKRAWEKLLLAACAIVATE |
Parental | NPADVSVISSRNTGXRAVLKFAAATGATPIAGRFT-PGTFTNQIQAAFREPRLLVVTDPRADHQPLTEAS |
NPADVSV.SSRNTG.RAVLKFAAATGATP.AGRFT..GTFTNQIQAAFRE..LLVVTD.RADHQPLTE.S | |
Retrocopy | NPADVSVRSSRNTGQRAVLKFAAATGATPMAGRFT<SGTFTNQIQAAFRELHLLVVTDSRADHQPLTEVS |
Parental | YVNLPTIALCNTDSPLRYVDIAIPCNNKVAGSLGLTWWMLAREVLR |
YVNLP.IALCNTDSPL..V..AIPCNNK.A.S.GL..WMLAREVLR | |
Retrocopy | YVNLPAIALCNTDSPLHSVVTAIPCNNKGAHSVGL-MWMLAREVLR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |