Parental gene:

SAR1A, ENSGGOG00000024879

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:10:82662702..82683002(-)


>ENSGGOG00000024879
ATGTCTTTCATCTTTGAGTGGATCTACAATGGCTTCAGCAGTGTGCTCCAGTTCCTAGGACTGTACAAGAAATCTGGAAA
ACTTGTATTCTTAGGTTTGGATAATGCAGGCAAAACCACTCTTCTTCACATGCTCAAAGATGACAGATTGGGCCAACATG
TTCCAACACTACATCCGACATCAGAAGAGCTAACAATTGCTGGAATGACCTTTACAACTTTTGATCTTGGTGGGCACGAG
CAAGCACGTCGGGTTTGGAAAAATTATCTTCCAGCAATTAATGGGATTGTCTTTCTGGTGGACTGTGCAGATCATTCTCG
CCTCGTGGAATCCAAAGTTGAGCTTAATGCTTTAATGACTGATGAAACAATATCCAATGTGCCAATCCTTATCTTGGGTA
ACAAAATTGACAGAACAGATGCAATCAGTGAAGAAAAACTCCGTGAGATATTTGGGCTTTATGGACAGACCACAGGAAAG
GGGAATGTGACCCTGAAGGAGCTGAATGCTCGCCCCATGGAAGTGTTCATGTGCAGTGTGCTCAAGAGGCAAGGTTACGG
CGAGGGTTTCCGCTGGCTCTCCCAGTATATTGACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 54 .96 RPM
SRP007412_cerebellum 52 .24 RPM
SRP007412_heart 18 .95 RPM
SRP007412_kidney 73 .07 RPM
SRP007412_liver 58 .37 RPM
SRP007412_testis 63 .09 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017868 possible_ortholog 1 retrogene
retro_amel_1698,
Callithrix jacchus ENSCJAG00000016353 ortholog_one2one 5 retrogenes
retro_cjac_1006, retro_cjac_2242, retro_cjac_2305, retro_cjac_4081, retro_cjac_957,
Homo sapiens ENSG00000079332 ortholog_one2one 4 retrogenes
retro_hsap_2976, retro_hsap_3568, retro_hsap_4714, retro_hsap_639,
Microcebus murinus ENSMICG00000001638 possible_ortholog 5 retrogenes
retro_mmur_1291, retro_mmur_1517, retro_mmur_1633, retro_mmur_260, retro_mmur_618,
Myotis lucifugus ENSMLUG00000006626 ortholog_one2many 2 retrogenes
retro_mluc_1317, retro_mluc_1996,
Mustela putorius furo ENSMPUG00000004338 possible_ortholog 1 retrogene
retro_mputfur_225,
Nomascus leucogenys ENSNLEG00000011243 ortholog_one2one 4 retrogenes
retro_nleu_1987, retro_nleu_2231, retro_nleu_2311, retro_nleu_2759,
Oryctolagus cuniculus ENSOCUG00000004547 possible_ortholog 1 retrogene
retro_ocun_638,
Otolemur garnettii ENSOGAG00000005040 ortholog_one2many 3 retrogenes
retro_ogar_1447, retro_ogar_1981, retro_ogar_2467,
Pongo abelii ENSPPYG00000002374 ortholog_one2one 4 retrogenes
retro_pabe_2468, retro_pabe_2940, retro_pabe_3661, retro_pabe_565,
Pan troglodytes ENSPTRG00000002584 ortholog_one2one 4 retrogenes
retro_ptro_2011, retro_ptro_2423, retro_ptro_3133, retro_ptro_465,
Ictidomys tridecemlineatus ENSSTOG00000012780 ortholog_one2many 2 retrogenes
retro_itri_1191, retro_itri_590,
Tupaia belangeri ENSTBEG00000008657 ortholog_one2many 5 retrogenes
retro_tbel_1060, retro_tbel_14, retro_tbel_2319, retro_tbel_2366, retro_tbel_2846,
Tarsius syrichta ENSTSYG00000005955 ortholog_one2many 2 retrogenes
retro_tsyr_1204, retro_tsyr_2099,
Vicugna pacos ENSVPAG00000002631 ortholog_one2many 2 retrogenes
retro_vpac_5, retro_vpac_77,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_144 81.58 95.96
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2. retro_ggor_2408 85.93 100.00
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3. retro_ggor_2929 78.28 99.49
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Download FASTA sequences of all ENSGGOG00000024879 retrocopies