Parental gene:

HNRNPH1, ENSGGOG00000025844

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:5:164174038..164182661(-)


>ENSGGOG00000025844
ATGATGTTGGGCACCGAAGGTGGAGAGGGATTCGTGGTGAAGGTCCGGGGCTTGCCCTGGTCTTGCTCGGCCGATGAAGT
GCAGAGGTTTTTTTCTGACTGCAAAATTCAAAATGGGGCTCAAGGTATTCGTTTCATCTACACCAGAGAAGGCAGACCAA
GTGGCGAGGCTTTTGTTGAACTTGAATCAGAAGATGAAGTCAAATTGGCCCTGAAAAAAGACAGAGAAACTATGGGACAC
AGATATGTTGAAGTATTCAAGTCAAACAACGTTGAAATGGATTGGGTGTTGAAGCATACTGGTCCAAATAGTCCTGACAC
GGCCAATGATGGCTTTGTACGGCTTAGAGGACTTCCCTTTGGATGTAGCAAGGAAGAAATTGTTCAGTTCTTCTCAGGGT
TGGAAATCGTGCCAAATGGGATAACATTGCCGGTGGACTTCCAGGGGAGGAGTACGGGGGAGGCCTTCGTGCAGTTTGCT
TCACAGGAAATAGCTGAAAAGGCTCTAAAGAAACACAAGGAAAGAATAGGGCACAGGTATATTGAAATCTTTAAGAGCAG
TAGAGCTGAAGTTAGAACTCACTATGATCCACCACGAAAGCTTATGGCCATGCAGCGGCCAGGTCCTTATGACAGACCTG
GGGCTGGTAGAGGGTATAACAGCATTGGCAGAGGAGCTGGCTTTGAGAGGATGAGGCGTGGTGCTTATGGTGGAGGCTAT
GGAGGCTATGATGATTACAATGGCTATAATGATGGCTATGGATTTGGGTCAGATAGATTTGGAAGAGACCTCAATTACTG
TTTTTCAGGAATGTCTGATCACAGATACGGGGATGGTGGCTCTACTTTCCAGAGCACAACAGGACACTGTGTACACATGC
GGGGATTACCTTACAGAGCTACTGAGAATGACATTTATAATTTTTTTTCACCGCTCAATCCTGTGAGAGTACACATTGAA
ATTGGTCCTGATGGCAGAGTAACTGGTGAAGCAGATGTCGAGTTCGCAACTCATGAAGATGCTGTGGCAGCTATGTCAAA
AGACAAAGCAAATATGCAACACAGATATGTAGAACTCTTCTTGAATTCTACAGCAGGAGCAAGCGGTGGTGCTTATGGTA
GCCAAATGATGGGAGGCATGGGCTTGTCAAACCAGTCCAGCTACGGGGGCCCAGCCAGCCAGCAGCTGAGTGGGGGTTAC
GGAGGCGGCTACGGTGGCCAGAGCAGCATGAGTGGATACGGTAACCAAGGAGCAGTGAACAGCAGCTACTACAGTAGTGG
AAGCCGTGCATCTATGGGCGTGAACGGAATGGGAGGGATGTCTAGCATGTCCAGTATGAGTGGTGGATGGGGAATGTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 144 .05 RPM
SRP007412_cerebellum 224 .10 RPM
SRP007412_heart 78 .89 RPM
SRP007412_kidney 227 .75 RPM
SRP007412_liver 176 .73 RPM
SRP007412_testis 349 .44 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000009389 ortholog_one2one 1 retrogene
retro_btau_130,
Canis familiaris ENSCAFG00000000336 ortholog_one2one 2 retrogenes
retro_cfam_200, retro_cfam_230,
Choloepus hoffmanni ENSCHOG00000003841 possible_ortholog 4 retrogenes
retro_chof_1051, retro_chof_1235, retro_chof_1491, retro_chof_2650,
Callithrix jacchus ENSCJAG00000009931 possible_ortholog 1 retrogene
retro_cjac_127,
Dipodomys ordii ENSDORG00000005453 ortholog_one2one 1 retrogene
retro_dord_3,
Equus caballus ENSECAG00000014429 possible_ortholog 1 retrogene
retro_ecab_94,
Echinops telfairi ENSETEG00000011303 possible_ortholog 1 retrogene
retro_etel_50,
Myotis lucifugus ENSMLUG00000016625 possible_ortholog 1 retrogene
retro_mluc_124,
Macaca mulatta ENSMMUG00000010843 possible_ortholog 1 retrogene
retro_mmul_2,
Monodelphis domestica ENSMODG00000009436 possible_ortholog 3 retrogenes
retro_mdom_1301, retro_mdom_1302, retro_mdom_333,
Mustela putorius furo ENSMPUG00000000693 ortholog_one2one 1 retrogene
retro_mputfur_156,
Mus musculus ENSMUSG00000007850 ortholog_one2one 1 retrogene
retro_mmus_142,
Nomascus leucogenys ENSNLEG00000026658 ortholog_one2one 3 retrogenes
retro_nleu_1668, retro_nleu_28, retro_nleu_48,
Ochotona princeps ENSOPRG00000003513 possible_ortholog 1 retrogene
retro_opri_11,
Procavia capensis ENSPCAG00000006715 possible_ortholog 1 retrogene
retro_pcap_4,
Pteropus vampyrus ENSPVAG00000007670 possible_ortholog 1 retrogene
retro_pvam_23,
Sorex araneus ENSSARG00000003024 possible_ortholog 1 retrogene
retro_sara_29,
Sarcophilus harrisii ENSSHAG00000018204 possible_ortholog 1 retrogene
retro_shar_674,
Ictidomys tridecemlineatus ENSSTOG00000016376 ortholog_one2one 2 retrogenes
retro_itri_66, retro_itri_78,
Vicugna pacos ENSVPAG00000007485 possible_ortholog 2 retrogenes
retro_vpac_594, retro_vpac_614,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_177 77.54 91.37
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2. retro_ggor_1299 85.81 64.82
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Download FASTA sequences of all ENSGGOG00000025844 retrocopies