Parental gene:

MEST, ENSLAFG00000006066

Aliases:None
Description:None
Organism:Elephant (Loxodonta africana)
Coordinates:scaffold_5:99859997..99872518(+)


>ENSLAFG00000006066
ATGGTGCGCCGAGATCGCCTGCGCAGGATGAGGGAGTGGTGGGTCCAGGTGGGGTTGCTGGCTGTGCCCCTGCTGGCAGC
CTACCTGCACATCCCGCCCCCTCAGCTTTCCCCTGCTCTTCACTCGTGGAAGTCCTCAGGCAAATTTTTCACCTACAAGG
GACTGCACATCTTCTACCAAGACTCCATGGGTGTGGTCGGAAGTCCGGAGATAGTTGTGCTCCTCCATGGCTTTCCCACC
TCCAGCTACGACTGGTACAAGATTTGGGAAGGTCTGACCCTGAGGTTTCATCGAGTAATTGCCCTTGATTTCTTAGGCTT
TGGCTTCAGTGACAAACCGCGACCACACCACTACTCCATATTTGAGCAGGCCAGCATTGTGGAGGCGCTTCTGCGGCACC
TGGGGCTCCAGAACCGTAGGATCAACCTCCTGTCTCATGACTACGGAGACACTGTGGCTCAGGAGCTGCTGTATAGGTAC
AAGCAAAATCGATCTGGGCGGCTTACCATAAAGAGTCTCTGCCTGTCAAATGGAGGTATTTTTCCTGAGACTCACCGTCC
TCTCCTTCTCCAGAAGCTTCTTAAAGATGGAGGCGTGCTGTCACCCATCCTCACACGTTTGATGAACTTCTTTGTATTCT
CTCGAGGTCTCACCCCGGTCTTTGGGCCCTACACTCGGCCCTCTGAGAGTGAGCTGTGGGACATGTGGGCAGGAATACGC
AACAATGACGGGAACTTAGTCATTGACAGTCTCCTACAGTACATCAATCAGAGGAAGAAGTTTAGAAGACGCTGGGTGGG
AGCCCTTGCCTCTGTATCTATTCCCATTCATTTTATCTATGGGCCATTGGATCCCGTAAATCCCTACCCGGAGTTTTTGG
AGCTGTACAGGAAAACGCTGCCGCGGTCCACAGTGTCGATTCTGGATGACCACATTAGCCACTACCCACAGCTAGAGGAT
CCCATGGGCTTCTTGAATGCATATATGGGCTTCATCAACTCCTTCTGA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000005659 ortholog_one2one 2 retrogenes
retro_amel_1177, retro_amel_1874,
Callithrix jacchus ENSCJAG00000010760 ortholog_one2many 2 retrogenes
retro_cjac_1563, retro_cjac_3931,
Felis catus ENSFCAG00000022984 ortholog_one2one 5 retrogenes
retro_fcat_1067, retro_fcat_1645, retro_fcat_1693, retro_fcat_2004, retro_fcat_326,
Macropus eugenii ENSMEUG00000008227 ortholog_one2one 1 retrogene
retro_meug_885,
Microcebus murinus ENSMICG00000006129 ortholog_one2one 1 retrogene
retro_mmur_1091,
Macaca mulatta ENSMMUG00000009499 ortholog_one2many 2 retrogenes
retro_mmul_1936, retro_mmul_94,
Nomascus leucogenys ENSNLEG00000012841 ortholog_one2one 3 retrogenes
retro_nleu_1065, retro_nleu_515, retro_nleu_790,
Otolemur garnettii ENSOGAG00000009224 ortholog_one2one 1 retrogene
retro_ogar_3464,
Pongo abelii ENSPPYG00000018006 ortholog_one2one 4 retrogenes
retro_pabe_2337, retro_pabe_2510, retro_pabe_2511, retro_pabe_866,
Pan troglodytes ENSPTRG00000019698 ortholog_one2one 2 retrogenes
retro_ptro_1769, retro_ptro_2045,
Sorex araneus ENSSARG00000000502 ortholog_one2one 1 retrogene
retro_sara_352,
Ictidomys tridecemlineatus ENSSTOG00000020977 ortholog_one2one 2 retrogenes
retro_itri_1210, retro_itri_1610,
Tupaia belangeri ENSTBEG00000008404 ortholog_one2one 2 retrogenes
retro_tbel_1480, retro_tbel_526,
Tursiops truncatus ENSTTRG00000004934 ortholog_one2one 4 retrogenes
retro_ttru_1026, retro_ttru_1115, retro_ttru_1133, retro_ttru_1907,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lafr_578 77.48 88.36
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2. retro_lafr_584 82.53 97.61
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3. retro_lafr_748 78.22 88.36
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Download FASTA sequences of all ENSLAFG00000006066 retrocopies