Parental gene:

SFPQ, ENSMEUG00000014082

Aliases:None
Description:splicing factor proline/glutamine-rich [Source:HGNC Symbol;Acc:10774]
Organism:Wallaby (Macropus eugenii)
Coordinates:GeneScaffold_3058:10613..22037(-)


>ENSMEUG00000014082
ATGTCCCGGGACCGGTTCCGGAGTCGCGGGGGCGGCGGCGGCGGCTTCCACCGGCGCGGTGGTGGCGGCGGGCGAGGCGG
AGGCCTAAGCCATGACTTCCGTTCGCCGCCGCCGGGCATGGGCCTGAGCCAGAATCGAGGGCCGCTGGGCCCGGGCCCCG
TCCAGACCGGACCTAAGCCTTCCATCCCGCCGCCTCCGGCTCAGGTACTGGCGCAGCAACAAGCGCAGCGGCCGGCGCGG
CGGCTGCTGCGGCAGCCGCGGCGGCAGCAGCAACAGGCGTCGTCGCCAGACCCGCCGAAGCCNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNAGGGGCCCTCGCCTGGCGGGCCCCGCGGCCGCAGCGAAGAGAAGATCTCGGACTC
GGAGGGCTTTAAAGCAAATTTGTCTCTGTTGAGGAGGCCTGGCGAGAAAACTTATACACAGCGATGTAGGTTATTTGTTG
GAAATCTGCCAGCTGATATCACAGATGAAGACTTTAAAAGATTATTTGCTAAATATGGAGAACCTGGTGAAGTCTTTATT
AACAAAGGCAAAGGATTCGGTTTCATCAAACTGGAATCTAGAGCCCTGGCAGAAATTGCAAAAGCAGAACTTGATGATAC
ACCCATGAGAGGGAGACAACTTCGTGTTCGTTTTGCCACGCATGCAGCTGCCCTCTCTGTACGAAATCTTTCACCGTATG
TTTCCAATGAATTATTGGAAGAAGCATTCAGCCAATTTGGACCTATTGAAAGGGCTGTTGTAATTGTGGATGATCGAGGA
AGATCTACAGGAAAAGGCATAGTTGAATTTGCTTCTAAGCCAGCTGCAAGAAAAGCATTTGAACGATGCAGTGAAGGAGT
GTTTTTGTTGACAACAACTCCTCGTCCAGTCATTGTGGAACCACTTGAGCAACTAGATGATGAAGATGGTCTTCCTGAAA
AGCTTGCACAGAAGAATCCAATGTATCAAAAGGAGAGAGAGAACCCTCCACGTTTTGCTCAGCATGGGACCTTTGAGTTT
GAATATTCCCAGAGATGGAAGTCTTTAGATGAAATGGAAAAACAGCAAAGGGAGCAGGTTGAGAAAAACATGAAAGATGC
AAAAGACAAACTGGAAAGTGAAATGGAAGATGCATATCACGAGCATCAGGCAAATCTTCTACGCCAGGATCTAATGAGGC
GTCAAGAAGAGCTAAGACGGATGGAGGAACTTCACAATCAAGAAATGCAGAAACGCAAAGAAATACAGTTAAGGCAAGAG
GAAGAGCGGCGTAGAAGAGAAGAAGAAATGATGATTCGCCAACGTGAGATGGAAGAGCAAATGAGACGCCAAAGAGAAGA
AAGTTATAGTCGGATGGGATACATGGATCCACGTGAGAGAGAGATAAGAATGGGTGCAGGAACAATGAACATGGGAGATC
CCTATGGCTCAGGAAGCCAGAAATTTCCACCTCTAGGTGGTGGTGGCATAGGCTATGAGGCCAGCCCTGGAGTTCCACCA
ACAGCCCTGAGTGGTTCCATGATGGGAAGTGACATGCGTACTGAGCGCTTTGGGCAGGGAGGAGCTGGGCCTGTGGGTGG
GCAGGGCCCTAGAGGAATGGGACCTGGAACTCCAGGATATGGTAGAGGGAGAGAAGAATATGAAGGCCCAAACAAAAAGC
CCCGATTTTAG

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000003595 ortholog_one2many 1 retrogene
retro_cfam_198,
Callithrix jacchus ENSCJAG00000001431 ortholog_one2many 4 retrogenes
retro_cjac_1073, retro_cjac_2542, retro_cjac_2697, retro_cjac_486,
Felis catus ENSFCAG00000031287 ortholog_one2one 1 retrogene
retro_fcat_1989,
Gasterosteus aculeatus ENSGACG00000002034 ortholog_one2one 1 retrogene
retro_gacu_13,
Gadus morhua ENSGMOG00000011950 ortholog_one2many 1 retrogene
retro_gmor_20,
Oryctolagus cuniculus ENSOCUG00000001877 ortholog_one2one 1 retrogene
retro_ocun_1834,
Oreochromis niloticus ENSONIG00000017737 ortholog_one2one 1 retrogene
retro_onil_21,
Sarcophilus harrisii ENSSHAG00000016107 ortholog_one2many 1 retrogene
retro_shar_36,
Tetraodon nigroviridis ENSTNIG00000011331 ortholog_one2one 1 retrogene
retro_tnig_32,
Takifugu rubripes ENSTRUG00000003783 ortholog_one2one 1 retrogene
retro_trub_8,
Drosophila melanogaster FBgn0004227 ortholog_many2many 1 retrogene
retro_dmel_11,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_meug_164 96.64 64.22
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Download FASTA sequences of all ENSMEUG00000014082 retrocopies