Parental gene: | MMU.4214, ENSMMUG00000012473 |
| Aliases: | None |
| Description: | proteasome activator complex subunit 2 [Source:RefSeq peptide;Acc:NP_001244558] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 7:87037008..87040857(-) |
>ENSMMUG00000012473
ATGGCCAAGCCGTGTGGGGTGCGCCTGAGCGGGGAAGCCCGCAAACAGGTGGAGGTCTTCAGGCAGAATCTTTTCCAGGA
GGCTGAGGAATTCCTCTACAGATTCTTGCCACAGAAAATCATATACCTGAATCAGCTCTTGCAAGAGGACTCCCTCAATG
TGGCTGACCTGACTTCCCTCCGGGCCCCACTGGACATCCCCATCCCAGACCCTCCACCCAAGGATGATGAGATGGAAACA
GATAAGCAGGAGAAGAAAGAAGTCCCTAAGTGTGGATTTCTCCCTGGGAATGAGAAAGTCCTGTCCCTGCTTGCCCTGGT
TAAGCCAGAAGTCTGGACTCTCAAAGAGAAATGCATTCTGGTGATTACATGGATCCAGCACCTGATCCCCAAGATTGAAG
ATGGAAATGATTTTGGGGTAGCAATCCAGGAGAAGGTGCTGGAGAGGGTGAATGCCGTCAAGACCAAAGTGGAAGCTTTC
CAGACAACCATTTCCAAGTACTTCTCAGAACGTGGGGATGCTGTGGCCAAGGCCTCCAAGGAGACTCATGTAATGGATTA
CCGGGCCTTGGTGCATGAGCGAGATGAGGCAGCCTATGGGGAGCTCAGGGCCATGGTGCTGGACCTGAGGGCCTTCTATG
CCGAGCTTTATCATATCATCAGCAGCAACCTGGAGAAAATTGTCAACCCGAAGGGTGAAGAGAAGCCATCTATGTACTGA
ATGGCCAAGCCGTGTGGGGTGCGCCTGAGCGGGGAAGCCCGCAAACAGGTGGAGGTCTTCAGGCAGAATCTTTTCCAGGA
GGCTGAGGAATTCCTCTACAGATTCTTGCCACAGAAAATCATATACCTGAATCAGCTCTTGCAAGAGGACTCCCTCAATG
TGGCTGACCTGACTTCCCTCCGGGCCCCACTGGACATCCCCATCCCAGACCCTCCACCCAAGGATGATGAGATGGAAACA
GATAAGCAGGAGAAGAAAGAAGTCCCTAAGTGTGGATTTCTCCCTGGGAATGAGAAAGTCCTGTCCCTGCTTGCCCTGGT
TAAGCCAGAAGTCTGGACTCTCAAAGAGAAATGCATTCTGGTGATTACATGGATCCAGCACCTGATCCCCAAGATTGAAG
ATGGAAATGATTTTGGGGTAGCAATCCAGGAGAAGGTGCTGGAGAGGGTGAATGCCGTCAAGACCAAAGTGGAAGCTTTC
CAGACAACCATTTCCAAGTACTTCTCAGAACGTGGGGATGCTGTGGCCAAGGCCTCCAAGGAGACTCATGTAATGGATTA
CCGGGCCTTGGTGCATGAGCGAGATGAGGCAGCCTATGGGGAGCTCAGGGCCATGGTGCTGGACCTGAGGGCCTTCTATG
CCGAGCTTTATCATATCATCAGCAGCAACCTGGAGAAAATTGTCAACCCGAAGGGTGAAGAGAAGCCATCTATGTACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 8 .17 RPM |
| SRP007412_brain | 8 .40 RPM |
| SRP007412_cerebellum | 12 .27 RPM |
| SRP007412_heart | 17 .61 RPM |
| SRP007412_kidney | 30 .40 RPM |
| SRP007412_liver | 35 .94 RPM |
| SRP007412_testis | 8 .56 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000007167 | ortholog_one2many | 3 retrogenes | |
| Homo sapiens | ENSG00000100911 | ortholog_one2one | 4 retrogenes | |
| Gorilla gorilla | ENSGGOG00000016025 | ortholog_one2one | 4 retrogenes | |
| Mus musculus | ENSMUSG00000079197 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000015260 | ortholog_one2one | 4 retrogenes | |
| Otolemur garnettii | ENSOGAG00000016584 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000005684 | ortholog_one2one | 4 retrogenes | |
| Pan troglodytes | ENSPTRG00000006196 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_1229 | 66.49 | 76.57 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_1919 | 87.55 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmul_1940 | 73.85 | 80.33 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmul_2281 | 75.00 | 61.09 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000012473 retrocopies