RetrogeneDB ID: | retro_chof_2022 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_45741:10547..10952(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL32 | ||
Ensembl ID: | ENSCHOG00000013534 | ||
Aliases: | None | ||
Description: | ribosomal protein L32 [Source:HGNC Symbol;Acc:10336] |
Percent Identity: | 88.15 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MAALRPLIKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHML |
MAA.RPL.KPKI.KKRTKKFIRHQS.RYVKIK.NWRKPRG.DNRV.RRFKGQILMP.IGYGSNKK.KHML | |
Retrocopy | MAAFRPLVKPKIIKKRTKKFIRHQSERYVKIKHNWRKPRGVDNRVWRRFKGQILMPSIGYGSNKKMKHML |
Parental | PSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLRSEENE |
PSGF.KFLVHNVKE.EVLLMCNK.YCAEIAHNVSSKN.KA.VERAAQLAIRVTNPNARL.SEEN. | |
Retrocopy | PSGF*KFLVHNVKEMEVLLMCNKYYCAEIAHNVSSKNCKATVERAAQLAIRVTNPNARLCSEENK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |