Parental gene: | SMARCE1, ENSNLEG00000001957 |
| Aliases: | None |
| Description: | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:HGNC Symbol;Acc:11109] |
| Organism: | Gibbon (Nomascus leucogenys) |
| Coordinates: | GL397430.1:2503620..2526927(-) |
>ENSNLEG00000001957
ATGCCCAGCACACCAGGGTTTGTGGGATACAATCCATACAGTCATCTCGCCTACAACAACTACAGGCTGGGAGGGAACCC
GGGCACCAACAGCCGGGTCACGGCATCCTCTGGTATTACGATTCCAAAACCCCCAAAGCCACCAGATAAGCCGCTGATGC
CCTACATGAGGTACAGCAGAAAGGTCTGGGACCAAGTAAAGGCTTCCAACCCTGACCTAAAGTTGTGGGAGATTGGCAAG
ATTATTGGTGGCATGTGGCGAGATCTCACTGATGAAGAAAAACAAGAATATTTAAACGAATACGAAGCAGAAAAGATAGA
GTACAATGAATCTATGAAGGCCTATCATAATTCCCCTGCGTACCTTGCTTACATAAATGCAAAAAGTCGTGCAGAAGCTG
CTTTAGAGGAAGAAAGTCGACAGAGACAGTCTCGCATGGAGAAAGGAGAACCATACATGAGCATTCAGCCTGCTGAAGAT
CCAGATGATTATGATGATGGCTTTTCAATGAAGCATACAGCCACCGCCCGTTTCCAGAGAAACCACCGCCTCATCAGTGA
AATTCTTAGTGAGAGTGTGGTGCCAGACGTTCGGTCAGTTGTCACAACAGCTAGAATGCAGGTCCTCAAACGGCAGGTCC
AGTCCTTAATGGTTCATCAGCGAAAACTAGAAGCTGAACTTCTTCAAATAGAAGAACGACACCAGGAGAAGAAGAGGAAA
TTCCTGGAAAGCACAGATTCATTTAACAATGAACTTAAAAGGTTGTGCGGTCTGAAAGTAGAAGTGGATATGGAGAAAAT
TGCAGCTGAGATTGCACAGGCAGAGGAACAGGCCCGCAAAAGGCAGGAGGAAAGGGAGAAGGAGGCCGCAGAGCAAGCTG
AGCGCAGTCAGAGCAGCATCGTTCCTGAGGAAGAACAAGCAGCCAACAAAGGCGAGGAGAAGAAAGACGATGAGAACATT
CCAATGGAGACAGAAAAAAATTGCCAGCTCTGTCCTAGAAAAACCCTTACTTCTAGGTATACTGATTTTCCTGATTAA
ATGCCCAGCACACCAGGGTTTGTGGGATACAATCCATACAGTCATCTCGCCTACAACAACTACAGGCTGGGAGGGAACCC
GGGCACCAACAGCCGGGTCACGGCATCCTCTGGTATTACGATTCCAAAACCCCCAAAGCCACCAGATAAGCCGCTGATGC
CCTACATGAGGTACAGCAGAAAGGTCTGGGACCAAGTAAAGGCTTCCAACCCTGACCTAAAGTTGTGGGAGATTGGCAAG
ATTATTGGTGGCATGTGGCGAGATCTCACTGATGAAGAAAAACAAGAATATTTAAACGAATACGAAGCAGAAAAGATAGA
GTACAATGAATCTATGAAGGCCTATCATAATTCCCCTGCGTACCTTGCTTACATAAATGCAAAAAGTCGTGCAGAAGCTG
CTTTAGAGGAAGAAAGTCGACAGAGACAGTCTCGCATGGAGAAAGGAGAACCATACATGAGCATTCAGCCTGCTGAAGAT
CCAGATGATTATGATGATGGCTTTTCAATGAAGCATACAGCCACCGCCCGTTTCCAGAGAAACCACCGCCTCATCAGTGA
AATTCTTAGTGAGAGTGTGGTGCCAGACGTTCGGTCAGTTGTCACAACAGCTAGAATGCAGGTCCTCAAACGGCAGGTCC
AGTCCTTAATGGTTCATCAGCGAAAACTAGAAGCTGAACTTCTTCAAATAGAAGAACGACACCAGGAGAAGAAGAGGAAA
TTCCTGGAAAGCACAGATTCATTTAACAATGAACTTAAAAGGTTGTGCGGTCTGAAAGTAGAAGTGGATATGGAGAAAAT
TGCAGCTGAGATTGCACAGGCAGAGGAACAGGCCCGCAAAAGGCAGGAGGAAAGGGAGAAGGAGGCCGCAGAGCAAGCTG
AGCGCAGTCAGAGCAGCATCGTTCCTGAGGAAGAACAAGCAGCCAACAAAGGCGAGGAGAAGAAAGACGATGAGAACATT
CCAATGGAGACAGAAAAAAATTGCCAGCTCTGTCCTAGAAAAACCCTTACTTCTAGGTATACTGATTTTCCTGATTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000013573 | ortholog_one2many | 4 retrogenes | |
| Homo sapiens | ENSG00000073584 | ortholog_one2one | 5 retrogenes | |
| Gorilla gorilla | ENSGGOG00000011803 | ortholog_one2many | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000009821 | ortholog_one2one | 4 retrogenes | |
| Myotis lucifugus | ENSMLUG00000004609 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000004005 | ortholog_one2many | 3 retrogenes | |
| Mustela putorius furo | ENSMPUG00000014660 | possible_ortholog | 4 retrogenes | |
| Mus musculus | ENSMUSG00000037935 | ortholog_one2one | 5 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000008981 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000001652 | ortholog_one2one | 7 retrogenes | |
| Ochotona princeps | ENSOPRG00000000985 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000008456 | ortholog_one2many | 4 retrogenes | |
| Pan troglodytes | ENSPTRG00000022902 | ortholog_one2one | 5 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000011355 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000010676 | ortholog_one2one | 7 retrogenes | |
| Tupaia belangeri | ENSTBEG00000000770 | ortholog_one2one | 10 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_nleu_286 | 83.89 | 94.49 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_nleu_1060 | 80.71 | 56.81 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_nleu_2051 | 85.11 | 94.49 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_nleu_2083 | 83.18 | 94.49 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSNLEG00000001957 retrocopies