Parental gene:

HSPA8, ENSNLEG00000007419

Aliases:None
Description:None
Organism:Gibbon (Nomascus leucogenys)
Coordinates:GL397262.1:56621835..56626861(-)


>ENSNLEG00000007419
ATGTCCAAGGGACCTGCAGTTGGTATTGATCTTGGTACCACCTACTCTTGTGTGGGTGTTTTCCAGCACGGAAAAGTAGA
GATAATTGCCAATGATCAGGGAAACCGAACCACTCCAAGCTATGTCGCCTTTACGGACACTGAACGATTGATCGGTGATG
CCGCAAAGAATCAAGTTGCAATGAACCCCACCAACACAGTTTTTGATGCCAAACGTCTGATTGGACGCAGATTTGATGAT
GCTGTTGTCCAGTCTGATATGAAGCATTGGCCCTTCATGGTGGTGAATGATGCTGGCAGGCCCAAGGTCCAAGTAGAATA
CAAGGGAGAGACTAAAAGCTTTTATCCAGAGGAGGTATCCTCTATGGTTCTGACAAAGATGAAGGAAATTGCAGAAGCAT
ACCTTGGGAAGACTGTTACCAATGCTGTGGTCACAGTGCCAGCTTACTTTAATGACTCTCAGCGTCAGGCTACCAAAGAT
GCTGGAACTATTGCTGGTCTCAATGTACTTAGAATTATTAATGAGCCAACTGCTGCTGCTATTGCTTACGGCTTAGACAA
AAAGGTTGGAGCAGAAAGAAACGTGCTCATCTTTGACCTGGGAGGTGGCACTTTCGATGTGTCAATCCTCACAATTGAGG
ATGGAATCTTTGAGGTCAAGTCTACAGCTGGAGACACCCACTTGGGTGGAGAAGATTTTGACAACCGAATGGTCAACCAT
TTTATTGCTGAGTTTAAGCGCAAGCATAAGAAGGACATCAGTGAGAACAAGAGAGCCGTAAGACGCCTCCGTACTGCTTG
TGAACGTGCTAAGCGTACCCTCTCTTCCAGCACCCAGGCCAGTATTGAGATCGATTCTCTCTATGAAGGAATCGACTTCT
ATACCTCCATTACCCGTGCCCGATTTGAAGAATTGAATGCTGACCTGTTCCGTGGCACCCTGGACCCAGTAGAGAAAGCC
CTTCGAGATGCCAAACTAGACAAGTCACAGATTCATGATATTGTCCTGGTTGGTGGTTCTACTCGTATCCCCAAGATTCA
GAAGCTTCTTCAAGACTTCTTCAATGGAAAAGAACTGAATAAGAGCATCAACCCTGATGAAGCTGTTGCTTATGGTGCAG
CTGTCCAGGCAGCCATCTTGTCTGGAGACAAGTCTGAAAATGTTCAAGATCTGCTGCTCTTGGATGTCACTCCTCTTTCC
CTTGGTATTGAAACTGCTGGTGGAGTCATGACCGTCCTCATCAAGCGTAATACCACCATTCCTACCAAGCAGACACAGAC
CTTCACTACCTATTCTGACAACCAGCCTGGTGTGCTTATTCAGGTTTATGAAGGCGAGCGTGCCATGACCAAGGATAACA
ACCTGCTTGGCAAGTTTGAACTCACAGGCATACCTCCTGCACCCCGAGGTGTTCCTCAGATTGAAGTCACTTTTGACATT
GATGCCAATGGTATCCTCAATGTCTCTGCTGTGGACAAGAGTACAGGAAAAGAGAATAAGATTACTATCACTAATGACAA
GGGCCGTTTGAGCAAGGAAGACATTGAACGTATGGTCCAGGAAGCTGAGAAGTACAAAGCTGAAGATGAGAAGCAGAGGG
ACAAGGTGTCATCCAAGAATTCACTTGAGTCCTATGCCTTCAACATGAAAGCAACTGTTGAAGATGAGAAACTTCAAGGC
AAGATTAATGATGAGGACAAACAGAAGATTCTGGACAAGTGTAATGAAATTATCAACTGGCTTGATAAGAATCAGACTGC
CGAGAAGGAAGAATTTGAACATCAACAGAAAGAGCTGGAGAAAGTTTGCAACCCCATCATCACCAAGCTGTACCAGAGTG
CAGGAGGCATGCCAGGAGGAATGCCTGGGGGATTCCCTGGTGGTGGAGCTCCTCCCTCTGGTGGTGCTTCCTCAGGGCCC
ACCATTGAAGAGGTTGATTAA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000004884 ortholog_one2one 2 retrogenes
retro_acar_21, retro_acar_6,
Anas platyrhynchos ENSAPLG00000010667 ortholog_one2one 1 retrogene
retro_apla_6,
Canis familiaris ENSCAFG00000011666 ortholog_one2one 3 retrogenes
retro_cfam_140, retro_cfam_191, retro_cfam_509,
Ciona intestinalis ENSCING00000009665 ortholog_one2many 1 retrogene
retro_cint_12,
Cavia porcellus ENSCPOG00000004169 possible_ortholog 3 retrogenes
retro_cpor_1072, retro_cpor_619, retro_cpor_938,
Ciona savignyi ENSCSAVG00000008588 ortholog_many2many 1 retrogene
retro_csav_3,
Equus caballus ENSECAG00000013510 ortholog_one2one 2 retrogenes
retro_ecab_291, retro_ecab_628,
Echinops telfairi ENSETEG00000010996 ortholog_one2one 1 retrogene
retro_etel_43,
Ficedula albicollis ENSFALG00000005812 ortholog_one2one 1 retrogene
retro_falb_18,
Gallus gallus ENSGALG00000006512 ortholog_one2one 1 retrogene
retro_ggal_8,
Loxodonta africana ENSLAFG00000030312 ortholog_one2one 4 retrogenes
retro_lafr_1218, retro_lafr_391, retro_lafr_790, retro_lafr_797,
Meleagris gallopavo ENSMGAG00000001929 ortholog_one2one 1 retrogene
retro_mgal_9,
Myotis lucifugus ENSMLUG00000004834 possible_ortholog 3 retrogenes
retro_mluc_1800, retro_mluc_2300, retro_mluc_777,
Monodelphis domestica ENSMODG00000012958 ortholog_one2many 2 retrogenes
retro_mdom_127, retro_mdom_99,
Mustela putorius furo ENSMPUG00000005810 ortholog_one2many 9 retrogenes
retro_mputfur_1048, retro_mputfur_1056, retro_mputfur_1144, retro_mputfur_131, retro_mputfur_188, retro_mputfur_309, retro_mputfur_627, retro_mputfur_694, retro_mputfur_958,
Nomascus leucogenys ENSNLEG00000017348 within_species_paralog 1 retrogene
retro_nleu_751,
Oreochromis niloticus ENSONIG00000004759 ortholog_one2many 1 retrogene
retro_onil_2,
Pelodiscus sinensis ENSPSIG00000012450 ortholog_one2one 2 retrogenes
retro_psin_17, retro_psin_5,
Ictidomys tridecemlineatus ENSSTOG00000003756 ortholog_one2one 1 retrogene
retro_itri_51,
Taeniopygia guttata ENSTGUG00000000491 ortholog_one2one 1 retrogene
retro_tgut_7,
Takifugu rubripes ENSTRUG00000005265 ortholog_one2one 1 retrogene
retro_trub_30,
Xiphophorus maculatus ENSXMAG00000001602 ortholog_one2many 1 retrogene
retro_xmac_20,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_nleu_64 85.45 100.00
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_nleu_119 86.24 99.85
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_nleu_175 90.11 57.59
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_nleu_370 71.31 73.07
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_nleu_1258 83.81 65.02
Please wait, loading
Please wait, loading
Please wait, loading
6. retro_nleu_1261 87.55 73.22
Please wait, loading
Please wait, loading
Please wait, loading
7. retro_nleu_1582 85.58 100.00
Please wait, loading
Please wait, loading
Please wait, loading
8. retro_nleu_1781 86.10 68.27
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSNLEG00000007419 retrocopies