Parental gene: | LSM14A, ENSNLEG00000011713 |
| Aliases: | None |
| Description: | None |
| Organism: | Gibbon (Nomascus leucogenys) |
| Coordinates: | GL397533.1:719265..777682(+) |
>ENSNLEG00000011713
ATGAGCGGGGGCACCCCTTACATCGGCAGCAAGATCAGCCTCATCTCCAAGGCGGAGATCCGCTACGAGGGCATCCTCTA
CACCATCGACACCGAAAACTCCACCGTAGCCCTTGCCAAAGTTCGATCCTTTGGTACAGAAGACAGACCAACAGATCGTC
CAATACCACCTCGAGATGAAGTCTTTGAATACATTATATTCCGTGGGAGTGACATTAAAGACCTTACTGTTTGTGAGCCG
CCAAAACCACAGTGTTCTTTGCCTCAAGACCCAGCTATTGTTCAGTCCTCACTAGGCTCATCGACTTCTTCATTCCAGTC
CATGGGTTCTTATGGGCCTTTCGGCAGGATGCCCACATACAGTCAGTTCAGTCCAAGTTCCTTAGTTGGGCAGCAGTTTG
GTGCTGTTGGTGTTGCTGGAAGCTCTTTGACATCCTTTGGAACAGAAACATCAAACAGTGGTACCTTACCCCAAAGTAGT
GCGGTTGGTTCTGCCTTTACACAGGATACAAGATCTCTAAAAACACAGTTATCTCAAGGTCGCTCAAGCCCTCAGTTAAA
CCCTTTGAGAAAAAGCCCAACCATGGAACAAGCAGTGCAGACCGCCTCGGCCCACTTACCTGCTCCAGCAGCTGTTGGGA
GAAGGAGTCCTGTATCAACCAGGCCTTTGCCATCTACCAGCCAAAAGGCAGGAGAGAATCAGGAGCACAGGCGAGCTGAA
GTACACAAAGTTTCAAGGCCAGAAAATGAGCAACTCAGAAATGATAACAAGAGACAAGTAGCTCCAGGTGCTCCTTCAGC
TCCAAGGAGAGGGCGTGGGGGTCATCGGGGTGGCAGGGGAAGATTTGGTATTCGGCGAGATGGGCCAATGAAATTTGAGA
AAGACTTTGACTTTGAAAGTGCAAATGCACAATTCAACAAGGAAGAGATTGACAGAGAGTTTCATAATAAACTTAAATTA
AAAGAAGATAAACTTGAGAAACAGGAGAAGCCTGTAAATGGTGAAGATAAAGGAGACTCAGGAGTTGATACCCAAAACAG
TGAAGGAAATGCTGATGAAGAAGATCCACTTGGACCTAATTGCTATTATGACAAAACTAAATCCTTCTTTGATAATATTT
CTTGTGATGACAATAGAGAACGGAGACCAACCTGGGCTGAAGAAAGAAGATTAAATGCTGAAACATTTGGAATCCCACTT
CGTCCAAACCGTGGCCGTGGGGGATACAGAGGCAGAGGAGGTCTTGGTTTCCGTGGTGGCAGAGGGCGTGGTGGTGGCAG
AGGTGGTACCTTCACTGCCCCTCGAGGATTTCGTGGAGGATTCAGAGGAGGTCGTGGGGGCCGGGAGTTTGCAGATTTTG
AATATAGGAAAACCACAGCTTTTGGACCCTAA
ATGAGCGGGGGCACCCCTTACATCGGCAGCAAGATCAGCCTCATCTCCAAGGCGGAGATCCGCTACGAGGGCATCCTCTA
CACCATCGACACCGAAAACTCCACCGTAGCCCTTGCCAAAGTTCGATCCTTTGGTACAGAAGACAGACCAACAGATCGTC
CAATACCACCTCGAGATGAAGTCTTTGAATACATTATATTCCGTGGGAGTGACATTAAAGACCTTACTGTTTGTGAGCCG
CCAAAACCACAGTGTTCTTTGCCTCAAGACCCAGCTATTGTTCAGTCCTCACTAGGCTCATCGACTTCTTCATTCCAGTC
CATGGGTTCTTATGGGCCTTTCGGCAGGATGCCCACATACAGTCAGTTCAGTCCAAGTTCCTTAGTTGGGCAGCAGTTTG
GTGCTGTTGGTGTTGCTGGAAGCTCTTTGACATCCTTTGGAACAGAAACATCAAACAGTGGTACCTTACCCCAAAGTAGT
GCGGTTGGTTCTGCCTTTACACAGGATACAAGATCTCTAAAAACACAGTTATCTCAAGGTCGCTCAAGCCCTCAGTTAAA
CCCTTTGAGAAAAAGCCCAACCATGGAACAAGCAGTGCAGACCGCCTCGGCCCACTTACCTGCTCCAGCAGCTGTTGGGA
GAAGGAGTCCTGTATCAACCAGGCCTTTGCCATCTACCAGCCAAAAGGCAGGAGAGAATCAGGAGCACAGGCGAGCTGAA
GTACACAAAGTTTCAAGGCCAGAAAATGAGCAACTCAGAAATGATAACAAGAGACAAGTAGCTCCAGGTGCTCCTTCAGC
TCCAAGGAGAGGGCGTGGGGGTCATCGGGGTGGCAGGGGAAGATTTGGTATTCGGCGAGATGGGCCAATGAAATTTGAGA
AAGACTTTGACTTTGAAAGTGCAAATGCACAATTCAACAAGGAAGAGATTGACAGAGAGTTTCATAATAAACTTAAATTA
AAAGAAGATAAACTTGAGAAACAGGAGAAGCCTGTAAATGGTGAAGATAAAGGAGACTCAGGAGTTGATACCCAAAACAG
TGAAGGAAATGCTGATGAAGAAGATCCACTTGGACCTAATTGCTATTATGACAAAACTAAATCCTTCTTTGATAATATTT
CTTGTGATGACAATAGAGAACGGAGACCAACCTGGGCTGAAGAAAGAAGATTAAATGCTGAAACATTTGGAATCCCACTT
CGTCCAAACCGTGGCCGTGGGGGATACAGAGGCAGAGGAGGTCTTGGTTTCCGTGGTGGCAGAGGGCGTGGTGGTGGCAG
AGGTGGTACCTTCACTGCCCCTCGAGGATTTCGTGGAGGATTCAGAGGAGGTCGTGGGGGCCGGGAGTTTGCAGATTTTG
AATATAGGAAAACCACAGCTTTTGGACCCTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000006555 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000001762 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000011598 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000003368 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000021614 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000011872 | ortholog_one2many | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000002492 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000009832 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000010813 | ortholog_one2one | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000021133 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000002785 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_nleu_485 | 81.15 | 52.27 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_nleu_1299 | 90.80 | 56.16 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_nleu_2544 | 89.29 | 60.48 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_nleu_2580 | 92.78 | 59.83 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSNLEG00000011713 retrocopies