Parental gene:

LSM14A, ENSCHOG00000006555

Aliases:None
Description:LSM14A, SCD6 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:24489]
Organism:Sloth (Choloepus hoffmanni)
Coordinates:GeneScaffold_1594:2025..35788(+)


>ENSCHOG00000006555
ATGAGCGGGGGCACCCCTTACATCGGCAGCAAGATCAGCCTCATTTCCAAGGCGGAGATCCGCTACGAGGGCATCCTCTA
CACCATCGACACCGAGAACTCCACCGTAGCTCTCGCCAAAGTTCGGTCATTTGGGACAGAAGACAGACCAACAGATCGTC
CAATACCACCTAGAGATGAAGTCTTTGAGTACATTATATTCCGCGGGAGTGATATTAAAGACCTCACTGTTTGTGAGCCA
CCAAAACCACAATGTTCTTTGCCTCAGGACCCAGCGATCGTTCAGTCTTCACTAGGCTCATCTACTTCTTCATTCCAGTC
AGTGGGCTCCTATGGACCTTTTGGCAGGATGTCAACGTACAGCCAGTTCAGTCCAAGTTCATTAGTTGGGCAGCAATTTG
GCGCTGTTGGTGTTGCTGGAAGCTCCTTGACATCCTTCGGAACAGAAACATCAAACAGCAGTACCTTGTCCCAAAGTAGT
GCCGTTGGTTCTGCCTTTACACAGGATACAAGATCTTTAAAAACACAGTTATCTCAAGGTCGTTCAAGCCCTCAGTTAGA
CCCTTTGAGAAAAAGCCCAACCATGGAACAAGCAGTACAGACCGCCTCGGCCCACTTACCTGCTCCAGCACCTGTTGGGA
GAAGGAGCCCTGTATCAACCAGGCCTGTGCCATCTACCAGCCAACCTGTGGTGGATCATCAGGAGCACAGGCGAGCTGAA
GCACACAAAGTTTCAAGACCAGAAAATGAGCAACTCAGAAATGATAGCAAGAGACAAGTAGTTCCAGGTGCTCCTTCAGC
TCCAAGGAGGGGACGTGGGGGTCATCGAGGTGGCAGAGGAAGATTTGGTATTCGGCGAGATGGTCCAATGAAATTTGAGA
AAGACTTTGACTTTGAAAGTGCGAATGCACAGTTTAATAAGGAGGAAATCGATAGAGAATTTCATAATAAACTTAAATTA
AAAGAAGATAAACTTGAGAAACAGGAGCCTGTAAATGGTGAAGATGGAGACTCCGGAGTTGATACCCAAAACAGTGAAAA
TGCTGATGAAGATCCACTTGGACCTAATTGCTATGACCAAACTAAATCCTTCTTNNNNNNNNNNNNNNNNNNNNNNNNNN
NAGAACGGAGACCAACCTGGGCTGAAGAAAGACGGTTAAATGCTGAAACATTTGGAATCCCACTTCGTCCAAATCGTGGC
CGTGGTGGGTACAGAGGCAGAGGAGGTCTTGGTTTCCGTGGTGGCAGAGGGCGTGGTGGTGGCAGAGGTGGTATCTTTAC
CACCCCTCGAGGATTTCGTGGCGGGTTTAGAGGCAGTCGCGGAGGCAGAGAATTTGCAGATTTTGAATATAGGAAAACCA
CAGCTTTTGGACCCTAA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000010360 ortholog_one2one 5 retrogenes
retro_cjac_1582, retro_cjac_2625, retro_cjac_3201, retro_cjac_3327, retro_cjac_840,
Gorilla gorilla ENSGGOG00000001762 ortholog_one2one 1 retrogene
retro_ggor_2378,
Microcebus murinus ENSMICG00000011598 ortholog_one2one 1 retrogene
retro_mmur_1605,
Myotis lucifugus ENSMLUG00000003368 ortholog_one2many 1 retrogene
retro_mluc_1793,
Macaca mulatta ENSMMUG00000021614 ortholog_one2many 2 retrogenes
retro_mmul_1386, retro_mmul_1860,
Nomascus leucogenys ENSNLEG00000011713 ortholog_one2one 4 retrogenes
retro_nleu_1299, retro_nleu_2544, retro_nleu_2580, retro_nleu_485,
Oryctolagus cuniculus ENSOCUG00000011872 ortholog_one2many 2 retrogenes
retro_ocun_193, retro_ocun_860,
Otolemur garnettii ENSOGAG00000002492 ortholog_one2one 2 retrogenes
retro_ogar_2586, retro_ogar_67,
Pongo abelii ENSPPYG00000009832 ortholog_one2one 2 retrogenes
retro_pabe_1693, retro_pabe_2906,
Pan troglodytes ENSPTRG00000010813 ortholog_one2one 3 retrogenes
retro_ptro_1343, retro_ptro_2389, retro_ptro_863,
Rattus norvegicus ENSRNOG00000021133 ortholog_one2one 1 retrogene
retro_rnor_2397,
Ictidomys tridecemlineatus ENSSTOG00000002785 ortholog_one2one 1 retrogene
retro_itri_170,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_chof_1375 94.53 98.69
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Download FASTA sequences of all ENSCHOG00000006555 retrocopies