Parental gene:

SRSF7, ENSOGAG00000010169

Aliases:None
Description:serine/arginine-rich splicing factor 7 [Source:HGNC Symbol;Acc:10789]
Organism:Bushbaby (Otolemur garnettii)
Coordinates:GL873614.1:2560082..2568972(+)


>ENSOGAG00000010169
ATGTCGCGTTACGGGCGGTATGGAGGAGAAACCAAGGTGTATGTTGGTAACCTGGGCACTGGTGCTGGCAAAGGAGAGTT
AGAAAGGGCTTTCAGTTATTATGGTCCTTTAAGAACTGTATGGATTGCGAGAAATCCTCCAGGATTTGCCTTTGTGGAAT
TTGAAGATCCTAGAGATGCAGAAGATGCAGTACGAGGACTGGATGGGAAGGTGATTTGTGGATCCCGAGTGAGGGTTGAA
CTATCAACAGGCATGCCTCGACGATCACGTTTTGATAGACCGCCTGCCCGACGTCCCTTTGATCCCAATGATAGATGCTA
CGAGTGTGGCGAAAAGGGACATTATGCTTATGATTGTCATCGCTACAGCCGGCGAAGGAGAAGCAGCTTGAAAAATAGGT
CAAGGTCTAGATCACATTCTCGATCCAGAGGAAGGCGATACTCTCGCTCTCGCAGCAGGAGCAGGGGACGGAGGTCAAGA
TCAGCATCTCCTCGACGATCAAGATCTGTGTCTCTTCGTAGATCAAGATCAGCTTCACTCAGAAGATCTAGGTCTGGTTC
TATAAAAGGATCGAGGTATTTCCAGTCCCGGTCAAGGTCAAGATCAAGATCCAGGTCTCTTTCCCGACCAAGAAGCAGCC
GATCAAAGTCCAGATCTCCGTCTCCAAAACGAAGTCGTTCCCCATCAGGAAGTCCGCGCAGAAGTGCAAGTCCTGAAAGA
ATGGACTGA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000015988 ortholog_one2one 1 retrogene
retro_amel_1025,
Canis familiaris ENSCAFG00000029620 ortholog_one2one 1 retrogene
retro_cfam_652,
Dasypus novemcinctus ENSDNOG00000007821 ortholog_one2one 2 retrogenes
retro_dnov_317, retro_dnov_829,
Macropus eugenii ENSMEUG00000016459 ortholog_many2many 1 retrogene
retro_meug_1048,
Myotis lucifugus ENSMLUG00000009536 ortholog_one2many 2 retrogenes
retro_mluc_2005, retro_mluc_972,
Monodelphis domestica ENSMODG00000008669 ortholog_many2many 1 retrogene
retro_mdom_289,
Mus musculus ENSMUSG00000024097 ortholog_one2one 1 retrogene
retro_mmus_3288,
Otolemur garnettii ENSOGAG00000000502 within_species_paralog 6 retrogenes
retro_ogar_1850, retro_ogar_1959, retro_ogar_2131, retro_ogar_2783, retro_ogar_597, retro_ogar_803,
Otolemur garnettii ENSOGAG00000003852 other_paralog 1 retrogene
retro_ogar_2328,
Otolemur garnettii ENSOGAG00000015515 other_paralog 1 retrogene
retro_ogar_2205,
Otolemur garnettii ENSOGAG00000025950 other_paralog 1 retrogene
retro_ogar_2848,
Rattus norvegicus ENSRNOG00000027360 ortholog_one2many 11 retrogenes
retro_rnor_1535, retro_rnor_1977, retro_rnor_1984, retro_rnor_2419, retro_rnor_2420, retro_rnor_2421, retro_rnor_2495, retro_rnor_2501, retro_rnor_2502, retro_rnor_2503, retro_rnor_478,
Sarcophilus harrisii ENSSHAG00000015970 ortholog_many2many 1 retrogene
retro_shar_72,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ogar_3467 64.25 72.31
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2. retro_ogar_3481 77.14 86.78
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Download FASTA sequences of all ENSOGAG00000010169 retrocopies