Parental gene:

Srsf7, ENSMUSG00000024097

Aliases:Srsf7, 35kDa, 9430065L19Rik, 9G8, NX-96, Sfrs7
Description:serine/arginine-rich splicing factor 7 [Source:MGI Symbol;Acc:MGI:1926232]
Organism:Mouse (Mus musculus)
Coordinates:17:80200088..80207305(-)


>ENSMUSG00000024097
ATGTCACGCTACGGGCGGTATGGAGGAGAAACCAAGGTATATGTTGGTAACCTGGGAACTGGTGCTGGTAAAGGAGAGTT
AGAAAGGGCATTCAGTTACTATGGGCCCTTAAGAACTGTGTGGATTGCCAGAAATCCTCCAGGATTCGCCTTTGTGGAAT
TTGAAGACCCTAGAGATGCAGAGGATGCAGTTCGAGGATTGGATGGGAAAGTGATTTGTGGTTCTCGAGTGAGGGTTGAA
CTATCAACAGGCATGCCTCGGAGATCTCGTTTTGATAGGCCACCTGCCCGTCGTCCCTTTGATCCTAATGATAGATGCTA
TGAGTGTGGTGAAAAGGGACATTATGCTTATGACTGTCATCGCTATAGCCGACGAAGAAGAAGCAGGTCACGATCTAGAT
CCCATTCCCGATCCAGGGGAAGGCGATACTCTCGCTCCCGCAGCAGGAGCCGAGGACGGAGGTCAAGATCAGCATCTCCT
CGCCGATCAAGGTCTGTGTCTCTTCGTAGATCAAGATCAGCTTCACTCAGAAGATCTAGGTCTGGTTCTATAATAGGATC
GAGGTATTTCCAATCCCGCTCAAGGTCGAGATCAAGATCCAGGTCTATTTCACGACCAAGAAGCAGCCGATCAAAATCCA
GATCTCCATCTCCTAAAAGAAGTCGTTCCCCATCAGGAAGTCCACACAGAAGTGCAAGTCCAGAAAGAATGGACTGA

Library Parental gene expression (RPM)
SRP007412_brain 72 .45 RPM
SRP007412_cerebellum 61 .05 RPM
SRP007412_heart 31 .47 RPM
SRP007412_kidney 41 .73 RPM
SRP007412_liver 22 .07 RPM
SRP007412_testis 49 .95 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000015988 ortholog_one2one 1 retrogene
retro_amel_1025,
Canis familiaris ENSCAFG00000029620 ortholog_one2one 1 retrogene
retro_cfam_652,
Dasypus novemcinctus ENSDNOG00000007821 ortholog_one2one 2 retrogenes
retro_dnov_317, retro_dnov_829,
Macropus eugenii ENSMEUG00000016459 ortholog_one2many 1 retrogene
retro_meug_1048,
Myotis lucifugus ENSMLUG00000009536 ortholog_one2many 2 retrogenes
retro_mluc_2005, retro_mluc_972,
Monodelphis domestica ENSMODG00000008669 ortholog_one2many 1 retrogene
retro_mdom_289,
Mus musculus ENSMUSG00000021134 other_paralog 1 retrogene
retro_mmus_2396,
Mus musculus ENSMUSG00000071172 within_species_paralog 9 retrogenes
retro_mmus_100, retro_mmus_1347, retro_mmus_1749, retro_mmus_2294, retro_mmus_2337, retro_mmus_2433, retro_mmus_2654, retro_mmus_2933, retro_mmus_3629,
Otolemur garnettii ENSOGAG00000010169 ortholog_one2one 2 retrogenes
retro_ogar_3467, retro_ogar_3481,
Rattus norvegicus ENSRNOG00000027360 ortholog_one2many 11 retrogenes
retro_rnor_1535, retro_rnor_1977, retro_rnor_1984, retro_rnor_2419, retro_rnor_2420, retro_rnor_2421, retro_rnor_2495, retro_rnor_2501, retro_rnor_2502, retro_rnor_2503, retro_rnor_478,
Sarcophilus harrisii ENSSHAG00000015970 ortholog_one2many 1 retrogene
retro_shar_72,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_3288 83.68 99.58
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Download FASTA sequences of all ENSMUSG00000024097 retrocopies