RetrogeneDB ID: | retro_mluc_2005 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429983:1392057..1392498(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SRSF7 | ||
Ensembl ID: | ENSMLUG00000009536 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 81.82 % |
Parental protein coverage: | 64.71 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MPRRSRLDRPPARRPFDPNDRCYECGEKGHYAYDCHRYSRRRRSRSRSRSHSRSRGRRYSRSRSRSRGRR |
MPRRSRLDRPPAR.PFDP.DRCYECGEKGHY.YDCHRYSRRRRSRSRSRS.SRSRGRRYSRSRSRSRGRR | |
Retrocopy | MPRRSRLDRPPARHPFDPSDRCYECGEKGHYVYDCHRYSRRRRSRSRSRSYSRSRGRRYSRSRSRSRGRR |
Parental | SRSASPRRSRSVSLRRSRSASLRRSRSGSIKGSRYFQSRSRSRSRSRSISRPRSSRSKSRSPSPKRSRSP |
S.................SASLRRSRSGSIKGSR...SRSRSRS....ISRPRSSRSKSRSPSPKRSRSP | |
Retrocopy | SXXXXXXXXXXXXXXXXPSASLRRSRSGSIKGSR---SRSRSRS----ISRPRSSRSKSRSPSPKRSRSP |
Parental | SGSPRRSASPERVD |
SGSPRRSASPERVD | |
Retrocopy | SGSPRRSASPERVD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000015988 | 1 retrocopy | |
Canis familiaris | ENSCAFG00000029620 | 1 retrocopy | |
Dasypus novemcinctus | ENSDNOG00000007821 | 2 retrocopies | |
Macropus eugenii | ENSMEUG00000016459 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000009536 | 2 retrocopies |
retro_mluc_2005 , retro_mluc_972,
|
Myotis lucifugus | ENSMLUG00000010671 | 6 retrocopies | |
Myotis lucifugus | ENSMLUG00000011040 | 1 retrocopy | |
Monodelphis domestica | ENSMODG00000008669 | 1 retrocopy | |
Mus musculus | ENSMUSG00000024097 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000010169 | 2 retrocopies | |
Rattus norvegicus | ENSRNOG00000027360 | 11 retrocopies | |
Sarcophilus harrisii | ENSSHAG00000015970 | 1 retrocopy |