RetrogeneDB ID: | retro_mluc_972 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429786:2035787..2036151(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SRSF7 | ||
Ensembl ID: | ENSMLUG00000009536 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 61.42 % |
Parental protein coverage: | 52.1 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | GHYAYDCHRYSR-RRRSRSRSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSVSLRRSRSASLRRSRS |
G.YAYDCH.YSR.RR.SRSR.RSH..SRGR.YS.SRSRSR.R.....................SL.RSRS | |
Retrocopy | GYYAYDCHCYSR*RRSSRSRFRSHFKSRGRQYSHSRSRSRTRKXXXXXXXXXXXXXXXXXXXVSLIRSRS |
Parental | GSIKGSRYFQSRSRSRS-RSRSISRPRSSRSKSRSPSP-KRSRSPSGSPRRSASPER |
GSIKG.R...S..RSRS..SR..S.PRSS.SKS.SPSP.KRS.S.SGS.RRSASPER | |
Retrocopy | GSIKGLR---SPWRSRS<KSRCLSWPRSS*SKSKSPSP<KRSYSSSGSLRRSASPER |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000015988 | 1 retrocopy | |
Canis familiaris | ENSCAFG00000029620 | 1 retrocopy | |
Dasypus novemcinctus | ENSDNOG00000007821 | 2 retrocopies | |
Macropus eugenii | ENSMEUG00000016459 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000009536 | 2 retrocopies |
retro_mluc_2005, retro_mluc_972 ,
|
Myotis lucifugus | ENSMLUG00000010671 | 6 retrocopies | |
Myotis lucifugus | ENSMLUG00000011040 | 1 retrocopy | |
Monodelphis domestica | ENSMODG00000008669 | 1 retrocopy | |
Mus musculus | ENSMUSG00000024097 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000010169 | 2 retrocopies | |
Rattus norvegicus | ENSRNOG00000027360 | 11 retrocopies | |
Sarcophilus harrisii | ENSSHAG00000015970 | 1 retrocopy |