Parental gene:

ARF3, ENSPPYG00000004473

Aliases:None
Description:ADP-ribosylation factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q5R5P7]
Organism:Orangutan (Pongo abelii)
Coordinates:12:48593333..48615369(-)


>ENSPPYG00000004473
ATGGGCAATATCTTTGGAAACCTTCTCAAGAGCCTGATTGGGAAGAAGGAGATGCGCATCCTGATGGTGGGCCTGGATGC
TGCAGGGAAGACCACCATCCTATACAAGCTGAAACTGGGGGAGATCGTCACGACCATCCCTACCATTGGGTTCAATGTGG
AGACAGTGGAATATAAGAACATCAGCTTCACAGTGTGGGATGTGGGTGGCCAGGACAAGATTCGACCCCTCTGGAGACAC
TACTTCCAGAACACCCAAGGATTGATATTTGTGGTCGACAGCAATGATCGGGAGCGAGTAAATGAGGCCCGGGAAGAGCT
GATGAGAATGCTGGCGGAGGACGAGCTCCGGGATGCTGTACTCCTTGTCTTTGCAAACAAACAGGATCTGCCTAATGCTA
TGAACGCTGCTGAGATCACAGACAAGCTGGGCCTGCATTCCCTTCGTCACCGTAACTGGTACATTCAGGCCACCTGTGCC
ACCAGCGGGGACGGGCTGTACGAAGGCCTGGACTGGCTGGCCAATCAGCTCAAAAACAAGAAGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 736 .91 RPM
SRP007412_cerebellum 177 .42 RPM
SRP007412_heart 23 .93 RPM
SRP007412_kidney 203 .72 RPM
SRP007412_liver 54 .96 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000007042 ortholog_one2one 2 retrogenes
retro_amel_28, retro_amel_70,
Canis familiaris ENSCAFG00000008767 ortholog_one2one 1 retrogene
retro_cfam_119,
Ciona savignyi ENSCSAVG00000007011 possible_ortholog 1 retrogene
retro_csav_2,
Felis catus ENSFCAG00000000088 ortholog_one2one 2 retrogenes
retro_fcat_2, retro_fcat_59,
Latimeria chalumnae ENSLACG00000019009 possible_ortholog 1 retrogene
retro_lcha_10,
Macropus eugenii ENSMEUG00000005072 ortholog_one2one 7 retrogenes
retro_meug_1036, retro_meug_1117, retro_meug_1857, retro_meug_29, retro_meug_395, retro_meug_616, retro_meug_946,
Myotis lucifugus ENSMLUG00000029846 ortholog_one2one 1 retrogene
retro_mluc_119,
Macaca mulatta ENSMMUG00000006968 ortholog_one2one 1 retrogene
retro_mmul_174,
Mustela putorius furo ENSMPUG00000014730 ortholog_one2one 1 retrogene
retro_mputfur_86,
Ochotona princeps ENSOPRG00000007411 ortholog_one2one 2 retrogenes
retro_opri_13, retro_opri_3,
Petromyzon marinus ENSPMAG00000000531 possible_ortholog 1 retrogene
retro_pmar_5,
Pongo abelii ENSPPYG00000000148 within_species_paralog 3 retrogenes
retro_pabe_3159, retro_pabe_849, retro_pabe_965,
Pongo abelii ENSPPYG00000013694 other_paralog 1 retrogene
retro_pabe_343,
Pongo abelii ENSPPYG00000013768 within_species_paralog 3 retrogenes
retro_pabe_1013, retro_pabe_1075, retro_pabe_3451,
Pteropus vampyrus ENSPVAG00000004626 ortholog_one2one 1 retrogene
retro_pvam_7,
Rattus norvegicus ENSRNOG00000033155 possible_ortholog 1 retrogene
retro_rnor_272,
Rattus norvegicus ENSRNOG00000048089 ortholog_one2one 1 retrogene
retro_rnor_2521,
Ictidomys tridecemlineatus ENSSTOG00000004295 ortholog_one2one 1 retrogene
retro_itri_175,
Tetraodon nigroviridis ENSTNIG00000011685 possible_ortholog 1 retrogene
retro_tnig_19,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_126 69.54 96.13
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Download FASTA sequences of all ENSPPYG00000004473 retrocopies