Parental gene:

GABARAP, ENSPPYG00000007901

Aliases:None
Description:GABA(A) receptor-associated protein [Source:HGNC Symbol;Acc:4067]
Organism:Orangutan (Pongo abelii)
Coordinates:17:7252087..7254426(-)


>ENSPPYG00000007901
ATGAAGTTCGTGTACAAAGAAGAGCATCCGTTCGAGAAGCGCCGCTCTGAGGGCGAGAAGATCCGAAAGAAATACCCGGA
CCGGGTGCCGGTGATAGTAGAAAAGGCTCCCAAAGCTCGGATAGGAGACCTGGACAAAAAGAAATACCTGGTGCCTTCTG
ATCTCACAGTTGGTCAGTTCTACTTCTTGATCCGGAAGCGAATTCATCTCCGAGCTGAGGATGCCTTGTTTTTCTTTGTC
AACAATGTCATTCCACCCACCAGTGCCACAATGGGTCAGCTCTACCAGGAACACCATGAAGAAGACTTCTTTCTCTACAT
TGCCTACAGTGACGAAAGTGTCTACGGTCTGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 160 .12 RPM
SRP007412_cerebellum 95 .34 RPM
SRP007412_heart 52 .32 RPM
SRP007412_kidney 162 .75 RPM
SRP007412_liver 124 .21 RPM



Species Parental gene accession Homology type Retrogenes number
Ciona intestinalis ENSCING00000012473 ortholog_one2one 1 retrogene
retro_cint_25,
Callithrix jacchus ENSCJAG00000016655 ortholog_one2one 2 retrogenes
retro_cjac_2851, retro_cjac_3820,
Gorilla gorilla ENSGGOG00000013770 ortholog_one2one 1 retrogene
retro_ggor_821,
Loxodonta africana ENSLAFG00000000744 possible_ortholog 1 retrogene
retro_lafr_61,
Macaca mulatta ENSMMUG00000010545 ortholog_one2many 1 retrogene
retro_mmul_155,
Mus musculus ENSMUSG00000018567 ortholog_one2one 1 retrogene
retro_mmus_3107,
Nomascus leucogenys ENSNLEG00000008049 ortholog_one2one 2 retrogenes
retro_nleu_1670, retro_nleu_4,
Oryctolagus cuniculus ENSOCUG00000006997 ortholog_one2one 1 retrogene
retro_ocun_311,
Pongo abelii ENSPPYG00000007565 within_species_paralog 2 retrogenes
retro_pabe_3368, retro_pabe_372,
Pongo abelii ENSPPYG00000007628 within_species_paralog 7 retrogenes
retro_pabe_1280, retro_pabe_1566, retro_pabe_245, retro_pabe_3157, retro_pabe_3158, retro_pabe_940, retro_pabe_978,
Pan troglodytes ENSPTRG00000034115 ortholog_one2one 1 retrogene
retro_ptro_60,
Rattus norvegicus ENSRNOG00000017417 ortholog_one2one 2 retrogenes
retro_rnor_1818, retro_rnor_2093,
Sus scrofa ENSSSCG00000017936 possible_ortholog 1 retrogene
retro_sscr_163,
Drosophila melanogaster FBgn0052672 ortholog_one2many 1 retrogene
retro_dmel_23,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_122 81.25 95.73
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Download FASTA sequences of all ENSPPYG00000007901 retrocopies