Parental gene: | SRSF6, ENSPPYG00000011019 |
| Aliases: | None |
| Description: | splicing factor, arginine/serine-rich 6 [Source:RefSeq peptide;Acc:NP_001182497] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 20:40819668..40827095(+) |
>ENSPPYG00000011019
ATGCCGCGCGTCTACATAGGACGCCTGAGCTACAATGTCCGGGAGAAAGACATCCAGCGATTTTTCAGTGGCTACGGCCG
CCTCCTCGAAGTAGACCTCAAAAATGGGTACGGCTTCGTGGAGTTCGAGGACTCCCGCGACGCCGACGACGCCGTTTACG
AGCTGAACGGCAAGGAGCTCTGCGGCGAGCGCGTGATCGTAGAGCACGCCCGGGGTCCGCGTCGCGATCGCGACGGCTAC
AGCTACGGAAGCCGCAGTGGTGGAGGTGGATACAGCAGTCGGAGAACATCTGGCAGAGACAAATACGGACCACCTGTTCG
TACAGAATACAGGCTTATTGTAGAAAATCTTTCTAGTCGGTGCAGTTGGCAAGATTTAAAGGATTTTATGCGACAAGCAG
GTGAAGTAACCTATGCGGATGCCCACAAGGAACGAACAAATGAGGGTGTAATTGAGTTTCGCTCCTACTCTGACATGAAG
CGTGCTTTGGACAAACTGGATGGCACAGAAATAAATGGCAGAAATATTAGGCTTATTGAAGATAAGCCACGCACAAGCCA
TAGGCGATCTTACTCTGGAAGCAGATCCAGGTCTCGATCTAGAAGACGGTCACGAAGTAGGAGTCGCAGGAGCAGCCGCA
GTAGATCTCGAAGTATCTCAAAAAGTCGCTCCCGTTCCAGGTCGCGGAGCAAAGGTCGATCACGTTCTCGATCAAAAGGC
AGGAAATCTAGATCAAAGAGCAAATCTAAGCCCAAGTCTGATCGGGGCTCCCATTCACATTCTCGAAGCAGATCTAAGGA
TGAGTATGAGAAATCTCGAAGCAGGTCTCGGTCCCGATCCCCCAAAGAAAATGGAAAGGGTGATATAAAGTCAAAATCCA
GATCAAGGAGCCAGTCCCGTTCCAATTCGCCGCTACCTGTTCCACCCTCAAAGGCCCGTTCTGTGTCCCCTCCACCAAAA
AGAGCTACTTCAAGATCCCGTTCTAGATCTCGCTCAAAGTCAAGATCAAGGTCCAGGTCGAGTTCCAGAGATTAA
ATGCCGCGCGTCTACATAGGACGCCTGAGCTACAATGTCCGGGAGAAAGACATCCAGCGATTTTTCAGTGGCTACGGCCG
CCTCCTCGAAGTAGACCTCAAAAATGGGTACGGCTTCGTGGAGTTCGAGGACTCCCGCGACGCCGACGACGCCGTTTACG
AGCTGAACGGCAAGGAGCTCTGCGGCGAGCGCGTGATCGTAGAGCACGCCCGGGGTCCGCGTCGCGATCGCGACGGCTAC
AGCTACGGAAGCCGCAGTGGTGGAGGTGGATACAGCAGTCGGAGAACATCTGGCAGAGACAAATACGGACCACCTGTTCG
TACAGAATACAGGCTTATTGTAGAAAATCTTTCTAGTCGGTGCAGTTGGCAAGATTTAAAGGATTTTATGCGACAAGCAG
GTGAAGTAACCTATGCGGATGCCCACAAGGAACGAACAAATGAGGGTGTAATTGAGTTTCGCTCCTACTCTGACATGAAG
CGTGCTTTGGACAAACTGGATGGCACAGAAATAAATGGCAGAAATATTAGGCTTATTGAAGATAAGCCACGCACAAGCCA
TAGGCGATCTTACTCTGGAAGCAGATCCAGGTCTCGATCTAGAAGACGGTCACGAAGTAGGAGTCGCAGGAGCAGCCGCA
GTAGATCTCGAAGTATCTCAAAAAGTCGCTCCCGTTCCAGGTCGCGGAGCAAAGGTCGATCACGTTCTCGATCAAAAGGC
AGGAAATCTAGATCAAAGAGCAAATCTAAGCCCAAGTCTGATCGGGGCTCCCATTCACATTCTCGAAGCAGATCTAAGGA
TGAGTATGAGAAATCTCGAAGCAGGTCTCGGTCCCGATCCCCCAAAGAAAATGGAAAGGGTGATATAAAGTCAAAATCCA
GATCAAGGAGCCAGTCCCGTTCCAATTCGCCGCTACCTGTTCCACCCTCAAAGGCCCGTTCTGTGTCCCCTCCACCAAAA
AGAGCTACTTCAAGATCCCGTTCTAGATCTCGCTCAAAGTCAAGATCAAGGTCCAGGTCGAGTTCCAGAGATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 49 .71 RPM |
| SRP007412_cerebellum | 118 .44 RPM |
| SRP007412_heart | 44 .40 RPM |
| SRP007412_kidney | 121 .25 RPM |
| SRP007412_liver | 119 .35 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000002061 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000006221 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000124193 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000009808 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000003107 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000006524 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000009785 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000005031 | within_species_paralog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000013506 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000006380 | ortholog_one2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000015410 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1483 | 89.28 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000011019 retrocopies