Parental gene:

UBE2E1, ENSPTRG00000014693

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:3:24205615..24290037(+)


>ENSPTRG00000014693
ATGTCGGATGACGATTCGAGGGCCAGCACCAGCTCCTCCTCATCTTCGTCTTCCAACCAGCAAACCGAGAAAGAAACAAA
CACCCCCAAGAAGAAGGAGAGTAAAGTCAGCATGAGCAAAAACTCCAAACTCCTCTCCACCAGCGCCAAGAGAATTCAGA
AGGAGCTGGCGGACATCACTTTAGACCCTCCACCTAATTGCAGTGCTGGTCCCAAAGGCGATAACATCTATGAATGGAGA
TCAACCATTCTAGGGCCTCCAGGATCCGTGTATGAGGGTGGTGTATTCTTTCTCGATATCACTTTTACACCAGAATATCC
CTTCAAGCCTCCAAAGGTTACATTTCGGACAAGAATCTATCATTGTAATATTAACAGTCAAGGTGTTATTTGCTTGGACA
TATTGAAAGATAATTGGAGTCCAGCACTAACCATTTCTAAAGTCCTCCTTTCTATCTGCTCACTTCTTACAGACTGTAAT
CCTGCCGACCCCTTGGTGGGAAGTATTGCCACTCAGTATATGACCAACAGAGCAGAACATGACAGAATGGCCAGACAGTG
GACCAAGAGATACGCTACATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 31 .28 RPM
SRP007412_cerebellum 27 .82 RPM
SRP007412_heart 26 .70 RPM
SRP007412_kidney 31 .23 RPM
SRP007412_liver 15 .65 RPM
SRP007412_testis 24 .66 RPM



Species Parental gene accession Homology type Retrogenes number
Ciona intestinalis ENSCING00000006860 ortholog_one2many 1 retrogene
retro_cint_33,
Cavia porcellus ENSCPOG00000002251 possible_ortholog 2 retrogenes
retro_cpor_1036, retro_cpor_52,
Gorilla gorilla ENSGGOG00000008393 ortholog_one2one 1 retrogene
retro_ggor_76,
Loxodonta africana ENSLAFG00000004150 ortholog_one2one 1 retrogene
retro_lafr_320,
Macropus eugenii ENSMEUG00000014517 ortholog_one2one 1 retrogene
retro_meug_2089,
Mus musculus ENSMUSG00000021774 ortholog_one2one 3 retrogenes
retro_mmus_2493, retro_mmus_2600, retro_mmus_537,
Otolemur garnettii ENSOGAG00000007527 ortholog_one2one 3 retrogenes
retro_ogar_2029, retro_ogar_2566, retro_ogar_626,
Pan troglodytes ENSPTRG00000014114 other_paralog 1 retrogene
retro_ptro_123,
Pan troglodytes ENSPTRG00000017303 other_paralog 3 retrogenes
retro_ptro_26, retro_ptro_3141, retro_ptro_341,
Rattus norvegicus ENSRNOG00000008794 ortholog_one2one 3 retrogenes
retro_rnor_1632, retro_rnor_2291, retro_rnor_2343,
Sarcophilus harrisii ENSSHAG00000001416 ortholog_one2one 1 retrogene
retro_shar_712,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_68 78.12 99.48
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Download FASTA sequences of all ENSPTRG00000014693 retrocopies