Parental gene:

UBE2E1, ENSGGOG00000008393

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:3:24552379..24640004(+)


>ENSGGOG00000008393
ATGTCGGATGACGATTCGAGGGCCAGCACCAGCTCCTCCTCATCTTCGTCTTCCAACCAGCAAACCGAGAAAGAAACAAA
CACCCCCAAGAAGAAGGAGAGTAAAGTCAGCATGAGCAAAAACTCCAAACTCCTCTCCACCAGCGCCAAGAGAATTCAGA
AGGAGCTGGCGGACATCACTTTAGACCCTCCACCTAATTGCAGTGCTGGTCCCAAAGGCGATAACATCTATGAATGGAGA
TCAACCATTCTAGGGCCTCCAGGATCCGTGTATGAGGGTGGTGTATTCTTTCTCGATATCACTTTTACACCAGAATATCC
CTTCAAGCCTCCAAAGGTTACATTTCGGACAAGAATCTATCATTGTAATATTAACAGTCAAGGTGTTATTTGCTTGGACA
TATTGAAAGATAATTGGAGTCCAGCACTAACCATTTCTAAAGTCCTCCTTTCTATCTGCTCACTTCTTACAGACTGTAAT
CCTGCCGACCCCTTGGTGGGAAGTATTGCCACTCAGTATATGACCAACAGAGCAGAACATGACAGAATGGCCAGACAGTG
GACCAAGAGATACGCTACATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 19 .57 RPM
SRP007412_cerebellum 26 .51 RPM
SRP007412_heart 6 .60 RPM
SRP007412_kidney 32 .75 RPM
SRP007412_liver 20 .21 RPM
SRP007412_testis 31 .81 RPM



Species Parental gene accession Homology type Retrogenes number
Ciona intestinalis ENSCING00000006860 ortholog_one2many 1 retrogene
retro_cint_33,
Cavia porcellus ENSCPOG00000002251 possible_ortholog 2 retrogenes
retro_cpor_1036, retro_cpor_52,
Gorilla gorilla ENSGGOG00000001368 other_paralog 2 retrogenes
retro_ggor_1156, retro_ggor_2321,
Gorilla gorilla ENSGGOG00000003378 other_paralog 3 retrogenes
retro_ggor_1843, retro_ggor_2936, retro_ggor_436,
Gorilla gorilla ENSGGOG00000010832 other_paralog 1 retrogene
retro_ggor_953,
Gorilla gorilla ENSGGOG00000028073 other_paralog 3 retrogenes
retro_ggor_1425, retro_ggor_861, retro_ggor_924,
Loxodonta africana ENSLAFG00000004150 ortholog_one2one 1 retrogene
retro_lafr_320,
Macropus eugenii ENSMEUG00000014517 ortholog_one2one 1 retrogene
retro_meug_2089,
Mus musculus ENSMUSG00000021774 ortholog_one2one 3 retrogenes
retro_mmus_2493, retro_mmus_2600, retro_mmus_537,
Otolemur garnettii ENSOGAG00000007527 ortholog_one2one 3 retrogenes
retro_ogar_2029, retro_ogar_2566, retro_ogar_626,
Pan troglodytes ENSPTRG00000014693 ortholog_one2one 1 retrogene
retro_ptro_68,
Rattus norvegicus ENSRNOG00000008794 ortholog_one2one 3 retrogenes
retro_rnor_1632, retro_rnor_2291, retro_rnor_2343,
Sarcophilus harrisii ENSSHAG00000001416 ortholog_one2one 1 retrogene
retro_shar_712,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_76 77.08 99.48
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Download FASTA sequences of all ENSGGOG00000008393 retrocopies