Parental gene:

Lsm12, ENSRNOG00000020894

Aliases:Lsm12, RGD1309441
Description:None
Organism:Rat (Rattus norvegicus)
Coordinates:10:89892924..89914903(-)


>ENSRNOG00000020894
ATGGCGGCTCCTCCGGGCGAGTACTTCAGCGTTGGGAGCCAGGTGTCGTGCCGGACGTGCCAGGAGCAGCGGCTGCAGGG
CGAGGTGGTAGCCTTCGACTACCAGTCCAAAATGCTGGCTCTAAAATGTCCCTCTTCCAGTGGAAAGCCCAACCATGCAG
ACATCTTGCTTATAAACTTACAGTATGTTTCAGAAGTGGAAATAATTAACGATCGAACAGAAACCCCTCCTCCCCTAGCT
TCACTCAATGTTAGTAAGCTTGCCAGCAAAGCACGGACGGAGAAGGAGGAGAAGCTGAGCCAGGCCTATGCAATCAGCGC
TGGCGTCTCCCTGGAGGGCCAGCAGCTCTTCCAGACCATTCACAAGACCATTAAAGACTGTAAATGGCAAGAAAAAAACA
TTGTAGTCATGGAAGAAGTTGTTATCACACCCCCATATCAAGTGGAAAATTGTAAAGGCAAAGAGGGGAGCGCACTGAGC
CATGTACGCAAAATAGTTGAAAAACATTTTAGAGACGTGGAAAGCCAAAAGATACTGCAGCGTTCACAAGCCCAACAACC
ACAGAAGGAGGCTGCCCTGTCATCCTGA

Library Parental gene expression (RPM)
SRP017611_brain 56 .01 RPM
SRP017611_kidney 49 .96 RPM
SRP017611_liver 28 .24 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000014379 ortholog_one2one 2 retrogenes
retro_cfam_1843, retro_cfam_312,
Echinops telfairi ENSETEG00000008374 ortholog_one2many 1 retrogene
retro_etel_21,
Felis catus ENSFCAG00000029083 ortholog_one2one 1 retrogene
retro_fcat_787,
Homo sapiens ENSG00000161654 ortholog_one2one 1 retrogene
retro_hsap_4041,
Loxodonta africana ENSLAFG00000005202 ortholog_one2one 1 retrogene
retro_lafr_906,
Macropus eugenii ENSMEUG00000007501 ortholog_one2one 1 retrogene
retro_meug_1462,
Macaca mulatta ENSMMUG00000006804 ortholog_one2one 1 retrogene
retro_mmul_3,
Mus musculus ENSMUSG00000020922 ortholog_one2one 1 retrogene
retro_mmus_2683,
Otolemur garnettii ENSOGAG00000010489 ortholog_one2one 2 retrogenes
retro_ogar_1771, retro_ogar_2447,
Oryzias latipes ENSORLG00000011310 ortholog_one2many 1 retrogene
retro_olat_12,
Tupaia belangeri ENSTBEG00000012523 ortholog_one2many 2 retrogenes
retro_tbel_3062, retro_tbel_60,
Vicugna pacos ENSVPAG00000011145 ortholog_one2one 1 retrogene
retro_vpac_627,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_2845 82.35 86.15
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Download FASTA sequences of all ENSRNOG00000020894 retrocopies