Parental gene:

CAPZA1, ENSSARG00000001278

Aliases:None
Description:capping protein (actin filament) muscle Z-line, alpha 1 [Source:HGNC Symbol;Acc:1488]
Organism:Shrew (Sorex araneus)
Coordinates:GeneScaffold_80:158155..204699(+)


>ENSSARG00000001278
ATGGCCGACTTCGAAGATCGGGTGTCGGATGAGGAGAAGGTACGTATAGCTGCAAAATTCATTACTCATGCACCCCCAGG
AGAATTTAACGAAGTGTTCAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCAT
TTGCCCAATATAACATGGATCAGTTCACGCCTGTGAAGATAGAAGGATATGAAGATCAGGTTTTAATTACAGAACATGGT
GACCTGGGCAATAGCAGATTTTTAGATCCAAGAAACAAGATTTCCTTTAAGTTTGATCACTTACGGAAAGAAGCCAGTGA
CCCCCAGCCTGAGGACGTAGATGGTAGTCTGAAGTTGTGGAGAGAATCCTGTGACAGTGCTTTAAGGACCTATGTGAAAG
ATCACTATTCCAACGGCTTCTGTACTGTTTATGCTAAAACTATAGATGGGCAACAGACCATTATTGCATGCATTGAAAGC
CACCAGTTTCAGCCTAAAAATTTCTGGAATGGTCGTTGGAGATCAGAGTGGAAGTTCACCATCGCCCCACCTACAGCTCA
AGTGGTGGGAGTACTTAAAATACAGGTTCACTATTATGAAGATGGGAATGTTCAGTTAGTTAGTCATAAAGATGTACAAG
ATTCAGTTACTGTTTCGAATGAAGTCCAAACTGCCAAGGAATTTATTAAAATCATAGAGCATGCAGAAAATGAGTATCAG
ACAGCAATTAGTGAGAACTACCAAACAATGTCAGATACCACGTTCAAGGCCTTGCGCAGGCAGCTTCCTGTCACCCGAAC
CAAGATCGACTGGAACAAGATCCTCAGCTACAAGATTGGGAAGGAAATGCAGAATGCTTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003570 possible_ortholog 1 retrogene
retro_amel_219,
Latimeria chalumnae ENSLACG00000017963 ortholog_one2one 1 retrogene
retro_lcha_20,
Myotis lucifugus ENSMLUG00000009796 ortholog_one2one 1 retrogene
retro_mluc_2483,
Mustela putorius furo ENSMPUG00000004977 ortholog_one2one 1 retrogene
retro_mputfur_616,
Mus musculus ENSMUSG00000070372 ortholog_one2many 4 retrogenes
retro_mmus_179, retro_mmus_1828, retro_mmus_3370, retro_mmus_349,
Oryctolagus cuniculus ENSOCUG00000000270 possible_ortholog 6 retrogenes
retro_ocun_1315, retro_ocun_1417, retro_ocun_1787, retro_ocun_301, retro_ocun_527, retro_ocun_555,
Rattus norvegicus ENSRNOG00000013538 ortholog_one2many 1 retrogene
retro_rnor_77,
Ictidomys tridecemlineatus ENSSTOG00000015956 possible_ortholog 1 retrogene
retro_itri_1044,
Tarsius syrichta ENSTSYG00000006259 ortholog_one2one 2 retrogenes
retro_tsyr_179, retro_tsyr_471,
Vicugna pacos ENSVPAG00000005361 ortholog_one2one 1 retrogene
retro_vpac_579,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sara_166 93.62 81.82
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Download FASTA sequences of all ENSSARG00000001278 retrocopies