Parental gene:

CAPZA1, ENSSTOG00000015956

Aliases:None
Description:capping protein (actin filament) muscle Z-line, alpha 1 [Source:HGNC Symbol;Acc:1488]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393500.1:1184807..1223669(+)


>ENSSTOG00000015956
ATGGCCGACTTCGAGGATCGGGTGTCGGATGAGGAGAAGGTACGTATAGCTGCTAAATTCATCACTCATGCACCCCCAGG
GGAGTTTAATGAAGTATTCAATGATGTCCGGCTACTACTTAACAATGACAATCTCCTCAGGGAAGGAGCAGCACATGCAT
TTGCCCAATATAACATGGACCAGTTCACACCTGTGAAGATAGAAGGATATGAAGATCAGGTCTTAATTACAGAGCATGGT
GACCTGGGTAATAGCCGATTTTTAGATCCAAGAAACAAAATTTCCTTTAAGTTTGATCACTTACGGAAAGAAGCAAGTGA
CCCTCAACCAGAGGAAGTAGAGGGAGGTTTGAAGTCTTGGAGAGAATCCTGTGACAATGCTTTAAGAGCCTATGTGAAAG
ATCATTATTCCAACGGCTTCTGTACTGTTTATGCTAAAACTATAGATGGGCAACAGACTATTATTGCATGTATTGAAAGC
CACCAGTTTCAGCCTAAAAACTTCTGGAATGGTCGTTGGAGATCAGAGTGGAAGTTCACTATTACACCACCTACAGCCCA
GGTGGTTGGAGTACTCAAGATTCAGGTTCACTATTATGAAGATGGAAATGTTCAGTTGGTTAGTCATAAAGATGTACAAG
ATTTAGTAACTGTTTCGAATGAAATCCAAACTGCCAAGGAGTTTATTAAAATCATAGAGAGTGCAGAAAATGAATATCAG
ACTGCAATTAGTGAAAACTACCAAACAATGTCAGACACCACATTCAAGGCCTTGCGCCGGCAGCTTCCAGTTACCCGCAC
CAAAATTGGAACAAGATACTCAGCTACAAGATTGGCAAAGAAATGCAGAATGCTTAAAGGCTGA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003570 possible_ortholog 1 retrogene
retro_amel_219,
Choloepus hoffmanni ENSCHOG00000004131 ortholog_one2one 8 retrogenes
retro_chof_1008, retro_chof_1419, retro_chof_1499, retro_chof_1704, retro_chof_1861, retro_chof_2129, retro_chof_625, retro_chof_711,
Latimeria chalumnae ENSLACG00000017963 ortholog_one2many 1 retrogene
retro_lcha_20,
Myotis lucifugus ENSMLUG00000009796 possible_ortholog 1 retrogene
retro_mluc_2483,
Mustela putorius furo ENSMPUG00000004977 possible_ortholog 1 retrogene
retro_mputfur_616,
Mus musculus ENSMUSG00000070372 possible_ortholog 4 retrogenes
retro_mmus_179, retro_mmus_1828, retro_mmus_3370, retro_mmus_349,
Oryctolagus cuniculus ENSOCUG00000000270 possible_ortholog 6 retrogenes
retro_ocun_1315, retro_ocun_1417, retro_ocun_1787, retro_ocun_301, retro_ocun_527, retro_ocun_555,
Rattus norvegicus ENSRNOG00000013538 possible_ortholog 1 retrogene
retro_rnor_77,
Sorex araneus ENSSARG00000001278 possible_ortholog 1 retrogene
retro_sara_166,
Ictidomys tridecemlineatus ENSSTOG00000024828 within_species_paralog 1 retrogene
retro_itri_1561,
Tarsius syrichta ENSTSYG00000006259 possible_ortholog 2 retrogenes
retro_tsyr_179, retro_tsyr_471,
Vicugna pacos ENSVPAG00000005361 possible_ortholog 1 retrogene
retro_vpac_579,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_1044 86.09 79.79
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Download FASTA sequences of all ENSSTOG00000015956 retrocopies