Parental gene:

ENSSTOG00000009955

Aliases:None
Description:None
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393281.1:23643853..23670011(+)


>ENSSTOG00000009955
ATGGACGCCATCAAGAAGAAGATGCAGATGCTGAAGCTCGACAAGGAGAACGCCTTGGATCGAGCAGAGCAGGCAGAGGC
CGACAAGAAGGCGGCAGAAGACAGGAGCAAACAGCTTGAGGAGGACATCGCGGCGAAGGAGAAGCTGCTGCGGGTGTCGG
AGGACGAGCGGGACCGGGTGCTGGAGGAGCTGCACAAGGCGGAGGACAGCCTCCTGGCCGCCGACGAGGCCGCCGCCAAG
CTGGAAGATGAGCTGGTGTCGCTGCAAAAGAAACTCAAGGGCACTGAAGATGAACTGGACAAATACTCTGAGGCTCTCAA
AGATGCCCAGGAGAAACTGGAGCTGGCGGAGAAAAAGGCCACTGATGCTGAAGCTGATGTAGCTTCTCTGAACAGACGCA
TCCAGCTGGTTGAGGAAGAGTTGGATCGTGCTCAGGAGCGTCTGGCAACAGCTTTGCAGAAGCTGGAGGAGGCTGAAAAA
GCAGCAGATGAAAGCGAGAGAGGCATGAAAGTCATTGAAAGTAGAGCCCAAAAGGATGAAGAAAAAATGGAAATTCAGGA
GATCCAACTGAAAGAGGCCAAGCACATTGCTGAAGATGCCGACCGAAAATATGAAGAGGTAGCCCGTAAGCTGGTCATCA
TTGAAAGTGACCTGGAACGTGCAGAGGAGCGGGCTGAGCTCTCAGAAGGCAAATGTGCCGAGCTTGAAGAAGAATTGAAA
ACTGTGACCAACAACTTGAAGTCACTGGAGGCTCAGGCTGAGAAGTACTCTCAGAAGGAAGACAAATATGAGGAAGAGAT
CAAGGTCCTTTCTGACAAGCTGAAGGAGGCTGAGACTCGGGCTGAGTTTGCCGAGAGGTCAGTAACTAAATTGGAGAAAA
GCATTGATGACTTAGAAGAGAAAGTGGCTCATGCCAAAGAAGAAAACCTTAGTATGCATCAGATGCTGGATCAGACTTTA
CTGGAGTTAAACAACATG

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000016966 ortholog_one2many 1 retrogene
retro_cfam_2167,
Choloepus hoffmanni ENSCHOG00000012788 ortholog_one2many 11 retrogenes
retro_chof_1194, retro_chof_1272, retro_chof_1360, retro_chof_1789, retro_chof_1829, retro_chof_2309, retro_chof_346, retro_chof_399, retro_chof_412, retro_chof_770, retro_chof_967,
Callithrix jacchus ENSCJAG00000004355 ortholog_one2one 2 retrogenes
retro_cjac_2200, retro_cjac_691,
Macropus eugenii ENSMEUG00000014581 ortholog_one2many 2 retrogenes
retro_meug_1944, retro_meug_2161,
Pongo abelii ENSPPYG00000006534 ortholog_one2one 1 retrogene
retro_pabe_624,
Rattus norvegicus ENSRNOG00000018184 possible_ortholog 1 retrogene
retro_rnor_734,
Ictidomys tridecemlineatus ENSSTOG00000023525 within_species_paralog 6 retrogenes
retro_itri_1453, retro_itri_1558, retro_itri_1837, retro_itri_231, retro_itri_674, retro_itri_709,
Ictidomys tridecemlineatus ENSSTOG00000024252 within_species_paralog 1 retrogene
retro_itri_1858,
Tursiops truncatus ENSTTRG00000003762 ortholog_one2many 1 retrogene
retro_ttru_446,
Vicugna pacos ENSVPAG00000003277 ortholog_one2many 1 retrogene
retro_vpac_424,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_166 65.44 66.56
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Download FASTA sequences of all ENSSTOG00000009955 retrocopies