Parental gene:

HNRNPH3, ENSVPAG00000011814

Aliases:None
Description:heterogeneous nuclear ribonucleoprotein H3 (2H9) [Source:HGNC Symbol;Acc:5043]
Organism:Alpaca (Vicugna pacos)
Coordinates:GeneScaffold_3119:2148060..2153378(+)


>ENSVPAG00000011814
ATGGATTGGGTTATGAAACATAATGGTCCAAATGACGCTAGTGATGGGACAGTACGACTTCGTGGACTACCATTTGGTTG
CAGCAAAGAGGAAATAGTTCAGTTCTTTCAAGGGTTGGAAATCGTGCCAAATGGGATAACATTGACGATGGACTACCAGG
GGAGAAGCACAGGGGAGGCCTTCGTGCAGTTTGCTTCAAAGGAGATAGCAGAAAATGCTCTGGGGAAACACAAGGAAAGA
ATAGGGCACAGGTATATTGAGATCTTCAGAAGTAGCAGAAGTGAAATCAAAGGATTTTATGATCCGCCAAGAAGATTGCT
GGGCCAGCGACCAGGACCATATGATAGACCAATAGGAGGAAGAGGGGGTTATTATGGAGCTGGGCGTGGAAGTATGTATG
ACAGAATGCGACGAGGAGGTGATGGATATGATGGTGGTTATGGAGGTTTTGATGACTATGGTGGCTATAATAATTACGGC
TATGGAAATGATGGCTTTGATGACAGAATGAGAGATGGAAGAGGTATGGGAGGACATGGCTATGGTGGAGCTGGCGATGC
AAGTTCAGGTTTTCATGGTGGTCATTTTGTACATATGAGAGGACTACCTTTTCGGGCAACTGAAAATGACATTGCTAATT
TCTTCTCACCACTAAATCCAATCCGAGTGCATATTGATATTGGAGCTGATGGCAGAGCAACCGGGGAAGCAGATGTAGAA
TTTGTGACACATGAAGATGCAGTAGCTGCCATGTCTAAAGACAAGAATAACATGCAACATCGATACATTGAACTCTTCTT
GAATTCTACCCCTGGAGGCGGCTCTGGAATGGGAGGTTCTGGAATGGGAGGCTACGGCAGAGATGGAATGGATAATCAAG
GAGGCTATGGATCTGTTGGAAGAATGGGAATGGGGAACAATTATAGCGGAGGTTACGGTACTCCTGATGGCTTGGGTGGT
TATGGCCGTGGTGGTGGAGGCAGTGGAGGTTACTATGGGCAAGGTGGCATGAGTGGAGGTGGATGGCGTGGGATGTAC

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000010365 ortholog_one2one 1 retrogene
retro_acar_184,
Ailuropoda melanoleuca ENSAMEG00000018064 ortholog_one2one 1 retrogene
retro_amel_1375,
Bos taurus ENSBTAG00000014316 ortholog_one2one 2 retrogenes
retro_btau_1504, retro_btau_470,
Callithrix jacchus ENSCJAG00000019154 ortholog_one2many 2 retrogenes
retro_cjac_292, retro_cjac_578,
Equus caballus ENSECAG00000007190 ortholog_one2one 1 retrogene
retro_ecab_912,
Gallus gallus ENSGALG00000003947 ortholog_one2one 1 retrogene
retro_ggal_16,
Macropus eugenii ENSMEUG00000013139 ortholog_one2one 1 retrogene
retro_meug_1627,
Mustela putorius furo ENSMPUG00000011997 ortholog_one2one 1 retrogene
retro_mputfur_1469,
Oryctolagus cuniculus ENSOCUG00000004443 ortholog_one2one 3 retrogenes
retro_ocun_1136, retro_ocun_1379, retro_ocun_1615,
Tursiops truncatus ENSTTRG00000013322 ortholog_one2one 2 retrogenes
retro_ttru_1744, retro_ttru_1766,
Vicugna pacos ENSVPAG00000007485 within_species_paralog 2 retrogenes
retro_vpac_594, retro_vpac_614,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_vpac_403 72.36 56.94
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSVPAG00000011814 retrocopies