Parental gene:

LPERR05G00860

Aliases:None
Description:None
Organism:Leersia perrieri
Coordinates:5:522687..524956(-)


>LPERR05G00860
ATGGGTCACGGCGTCAGCTGTGCGCGCACCGGCGACGAGCACGACTTCTTCCGGGCGGCGCAGGTCGGCGACCTCGACGC
CCTCGCCGCTCTCCTCGCCGCCGACCAATCCCTCGCTCGCCGCGCCACTCTCTACGACCGCCTCTCCGTCCTCCACATCG
CCGCCGCCAATGGCCGCATCGAGGTGCTCTCCATGTTCTTGGATCGCGGGGCGCCGCCGGACGCGGTGAATCGGCACAAG
CAGACGCCGCTGATGCTCGCGGCTATGCACGGCAAGATCGACTGCGTGCTCAAGCTCCTCCAGGCCGGCGCAAATGTGAG
AAAAACTGCAAAATCAGTGAGCCTTATTAGTATAATTCCGCTTGAAAAGATCACTGACAGTATGATTTCGCACCAGATCT
TGATGTTCGATTCGGTTCACGCGAGGACCTGCCTACACCACGCGGCGTACTACGGCCATGTCGATTGCCTACAGGCCATC
CTCTCCGCGGCGCAGACCACGCCAGTGGCTGATTCATGGGGTTTCGCCCGGTTTGTCAATGTCAGGGACGACCACGGCGC
CACACCGCTGCATCTCGCAGCCAGGCAGGGGCGGCCGGGGTGTGTGCAGATGTTGCTGGAGAACGGCGCCATTGTGTCGG
CTTTGACCGGATCATATGGCTTCCCTGGAAGCACGTCGTTGCATTTGGCCGCTCGTAGCGGGAATTTGGATTGCATCAGG
AAGTTGCTTGCCTGGGGAGCTGATCGGCTCCAAAGGGATTCGGCTGGGAGAATTCCCTATTCTGTTGCGCTGAAACGCAA
CCATGGAGCATGTGCAGCTTTGCTAAACCCTTCATCAGCAGAGCCAATGGTGTGGCCATCCCCACTTAAGTTCATCAGTG
AGCTTGATCCAGAAGCTAAAGCCCTCCTGGAAGCAGCTCTGATGGAAGCAAACAGGGAGAGGGAGAAGAAGATCCTGAAT
GGCACAAAGTACTCCCTGCCATCCCCTCCACCCTATGATGACAGTGCTGATGAAGATGCATGCTCAGAGGTTAGTGATGC
CGAGCTCTGCTGCATCTGCTTCGACCAGGCTTGCACCATTGAGGTGCAAGACTGTGGGCATCAAATGTGCGCACCGTGCA
CGCTGGCACTGTGCTGTCACAACAAACCTAATCCGACGACCCTGACACCGCCCTCACCGGCCTGCCCATTCTGCCGCGGC
AGCATCTCACGGCTGGTGGTGGCCCAAACAAGGTCTGCTTGTGATCCTGACAAGCCGGCATCCCCGCAGCTCACCCGAAG
GCGGTCTCGGCGATCTCACAACCTCAGTGAGGGCAGCAGCAGCTTCAAAGGGCTATCTTCAGCCATGGGCTCCTTCTCAA
AGCTTGGCCGTGGCTCGAGCCGCATGGCAGACAGTGACAGCGGTACCCTGGACAAGCCTGAGCACGATCTATGA

Species Parental gene accession Homology type Retrogenes number
Oryza sativa indica BGIOSGA018946 ortholog_one2one 1 retrogene
retro_oind_45,
Oryza barthii OBART05G00890 ortholog_one2one 1 retrogene
retro_obar_26,
Oryza glumaepatula OGLUM05G00910 ortholog_one2one 1 retrogene
retro_oglu_21,
Oryza meridionalis OMERI05G00950 ortholog_one2one 1 retrogene
retro_omer_12,
Oryza nivara ONIVA05G00830 ortholog_one2one 1 retrogene
retro_oniv_6,
Oryza punctata OPUNC05G00800 ortholog_one2one 1 retrogene
retro_opun_25,
Oryza glaberrima ORGLA05G0009300 ortholog_one2one 1 retrogene
retro_ogla_12,
Oryza rufipogon ORUFI05G00870 ortholog_one2one 1 retrogene
retro_oruf_36,
Oryza sativa japonica OS05G0112000 ortholog_one2one 1 retrogene
retro_osat_41,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lper_10 62.44 94.00
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Download FASTA sequences of all LPERR05G00860 retrocopies