Parental gene:

ONIVA05G00830

Aliases:None
Description:None
Organism:Indian wild rice (Oryza nivara)
Coordinates:5:550060..552395(-)


>ONIVA05G00830
ATGGGTCACGGTGTCAGCTGCGCCCGCACCGGCGACGAGCACGACTTCTTCCGGGCGGCGCAGCTCGGCGACCTCGACGC
CCTGGCCGCCCTCCTCGCCGCCGATCCTTCCCTCGCCCGCCGCGCCACCCTCTACGACCGCCTCTCCGTCCTCCACATCG
CCGCCGCCAATGGCCGCATCGAGGTGCTCTCCATGTTCTTGGATCGCGGGGCGCCGCCGGACGCGGTGAATCGGCACAAG
CAGACGCCGCTGATGCTCGCGGCCATGCACGGCAAGATCGACTGCGTGCTCAAGCTCCTCCAGGCCGACGCAAATATCTT
GATGTTCGACTCGGTGCACGCGAGGACCTGCCTCCACCACGCGGCGTACTACGGCCACGTCGACTGCCTGCAGGCCATCC
TCGCCGCCGCGCAGACCACGCCGGTGGCCGACTCATGGGGTTTCGCCCGGTTCGTCAACGTCAGGGACGACCACGGCGCC
ACGCCGCTGCATCTCGCGGCCAGGCAGGGGCGGCCGGGGTGCGTGCAGGTGTTGCTGGAGAACGGCGCCATTGTGTCGGC
TTTGACAGGATCATATGGCTTCCCTGGAAGCACGTCGCTTCATTTGGCTGCTCGTAGCGGGAACTTGGATTGCATCAGGA
AGCTGCTTGCCTGGGGAGCTGATCGGCTCCAAAGGGATTCGGCTGGGAGAATTCCCTATTCTGTTGCGCTGAAACGGAAC
CATGGAGCATGTGCAGCTTTGCTGAACCCTACATCAGCAGAGCCCATGGTGTGGCCATCCCCACTTAAGTTCATCAGTGA
GCTTGAACCAGAAGCTAAGGCTCTCCTGGAAGCAGCTCTGATGGAAGCCAACAGGGAGAGGGAGAAGAAAATCCTGAATG
GCACAAAGTACTCCCTGTCATCCCCTTCGCCCGGTGATGACAGTGCCGATGACGATGCATGCTCAGAGGTGAGCGACACG
GAGCTCTGCTGCATCTGCTTCGACCAGGCTTGCACCATTGAGGTGCAAGACTGTGGACATCAAATGTGTGCACCGTGCAC
GCTGGCACTGTGCTGTCACAACAAACCCAATCCGACGACCCTGACACCGCCCTCACCGGCCTGCCCATTCTGCCGGGGCA
GCATCTCACGGCTGGTGGTGGCCCAAACAAGGTCTACTTGTGATCCTGACAAGCCGTCATCCCCGCAGCTCACCCGGAAG
CGGTCGCGTCGATCTCACAACCTCAGTGAGGGCAGCAGCAGCTTCAAAGGGCTATCTTCGGCCATGGGCTCCTTCTCAAA
GCTTGGCCGTGGCTCGAGCCGCATGGCGGACAGTGACAGCAGCAACCTGGACAAGCCTGAGCACGATCTATGA

Species Parental gene accession Homology type Retrogenes number
Oryza sativa indica BGIOSGA018946 ortholog_one2one 1 retrogene
retro_oind_45,
Leersia perrieri LPERR05G00860 ortholog_one2one 1 retrogene
retro_lper_10,
Oryza barthii OBART05G00890 ortholog_one2one 1 retrogene
retro_obar_26,
Oryza glumaepatula OGLUM05G00910 ortholog_one2one 1 retrogene
retro_oglu_21,
Oryza meridionalis OMERI05G00950 ortholog_one2one 1 retrogene
retro_omer_12,
Oryza punctata OPUNC05G00800 ortholog_one2one 1 retrogene
retro_opun_25,
Oryza glaberrima ORGLA05G0009300 ortholog_one2one 1 retrogene
retro_ogla_12,
Oryza rufipogon ORUFI05G00870 ortholog_one2one 1 retrogene
retro_oruf_36,
Oryza sativa japonica OS05G0112000 ortholog_one2one 1 retrogene
retro_osat_41,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_oniv_6 63.59 77.78
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Download FASTA sequences of all ONIVA05G00830 retrocopies