Parental gene:

MLOC_55525

Aliases:None
Description:None
Organism:Barley (Hordeum vulgare)
Coordinates:2:408462331..408465102(-)


>MLOC_55525
ATGGCCGGCGGCGCGGTTGTGAACACCGGAGGGGGGAAGGACTACCCCGGCAAGCTCACCATGTTCGTGCTCTTCGCCTG
CATCGTCGCCGCCACCGGCGGCCTCATCTTCGGATATGACATAGGCATCTCCGGTGGCGTGACCTCGATGAACCCCTTCC
TGATGAAGTTCTTTCCGGGCGTGTACCACAAGGAGCAGGAGGCAGAGCGGAACCAGAGCAACCAGTACTGCAAGTTCGAC
AGCCAGCTGCTCACCATGTTCACCTCCTCGCTCTACCTCGCCGCGCTCGTCGCTTCCTTCTTCGCCGCCACCGTCAGCCG
CGTCGCCGGCCGCAAGTGGTCCATGTTCGCCGGCGGGGTCACCTTCCTCGTCGGCGCCGCGCTCAACGGCGCCGCCAAGA
ACGTCCTCATGCTCATCCTCGGACGCGTCCTGCTCGGCATCGGGGTCGGCTTCGCCAACCAGTCGGTGCCGGTGTACCTG
TCGGAGATGGCGCCGGCGAGGCTGAGGGGGATGCTCAACATTGGGTTCCAGCTGATGGTCACGATCGGCATCCTGTGCGC
GAACCTGATCAACTACGGGACGTCCAAGATCAAGGGCGGGTGGGGCTGGCGCGTGAGCCTCGCCCTGGCCGCGGTACCGG
CCGGAATCATCGCCATCGGCGCGCTCTTCCTCCCCGACACCCCCAACTCCCTCATCGACCGCGGCTACACCGACGATGCC
AAGAAGATGCTCCGGCGCGTGCGCGGCACGGACGACGTCGAGGAGGAGTACAGCGACCTGGTGGCCGCCAGCGATGAGTC
CAAGCTCGTGAGCCACCCGTGGCGCAACATCCTCCAGCGCCGCTACCGGCCGCAGCTCACCTTCGCGATCGCCATCCCCT
TCTTCCAGCAGCTCACCGGCATCAACGTCATCATGTTCTACGCGCCCGTGCTCTTCAAGACGCTCGGGTTCGCCGACGAC
GCGTCCCTCATGTCCGCCGTCATCACCGGCCTCGTCAACGTCTTCGCCACCTTCGTGTCCATCGTGACCGTGGACCGCCT
GGGCCGCCGCAAGCTCTTCCTGCAGGGCGGCACCCAGATGCTGGCCTGCCAGATCGTGGTCGGCAGCCTGATCGGCGCCA
AGTTCGGGTTCACCGGCGTGGCGGACATCCCCAGGGGGTACGCGGCGTTCGTGGTGTTCTTCATCTGCGCGTACGTGGCC
GGGTTCGCATGGTCCTGGGGCCCGCTCGGGTGGCTCGTCCCCAGCGAGATCTTCCCGCTGGAGATCAGGTCGGCGGGGCA
GAGCATCACGGTGTCGATGAACATGCTGTGCACCTTCATCATCGCGCAGGCGTTCCTCCCCATGCTCTGCCGCTTCAAGT
TCATGCTCTTCTTCTTCTTCGGGGCGTGGGTGATCGTCATGACCCTCTTCGTCGCATTCTTCCTGCCGGAGACCAAGAAC
GTGCCCATCGAGGAGATGGTGCTCGTGTGGAAGGCGCACTGGTACTGGGGCCGCTTCATCCGCGACGAGGACGTGCACGT
CGGCGCCGACGTCGAGATGCGCTCCAACGGCAACGGCAAGATCCAGGCTGCCAAGCTCCCGTGA

Species Parental gene accession Homology type Retrogenes number
Brachypodium distachyon BRADI1G24820 ortholog_one2one 1 retrogene
retro_bdis_38,
Medicago truncatula MTR_0009s0370 ortholog_many2many 1 retrogene
retro_mtru_23,
Oryza glumaepatula OGLUM07G18360 ortholog_one2one 1 retrogene
retro_oglu_7,
Oryza meridionalis OMERI07G15470 ortholog_one2one 2 retrogenes
retro_omer_15, retro_omer_8,
Oryza nivara ONIVA07G16940 ortholog_one2one 1 retrogene
retro_oniv_2,
Oryza punctata OPUNC07G17520 ortholog_one2one 1 retrogene
retro_opun_36,
Oryza glaberrima ORGLA07G0149800 ortholog_one2one 1 retrogene
retro_ogla_30,
Oryza rufipogon ORUFI07G19310 ortholog_one2one 1 retrogene
retro_oruf_45,
Oryza sativa japonica OS07G0559700 ortholog_one2one 1 retrogene
retro_osat_29,
Triticum aestivum Traes_2BS_7DF366FE1 ortholog_one2one 1 retrogene
retro_taes_36,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hvul_80 74.95 93.74
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Download FASTA sequences of all MLOC_55525 retrocopies