Parental gene:

TPX1, fgenesh2_kg.2__836__AT1G65980.1

Aliases:None
Description:Thioredoxin-dependent peroxidase 1 [Source:UniProtKB/TrEMBL;Acc:D7KT32]
Organism:Lyre-leaved rock-cress (Arabidopsis lyrata)
Coordinates:2:10564351..10565807(-)


>fgenesh2_kg.2__836__AT1G65980.1
ATGGCTCCAATCACCGTCGGCGATGTTGTACCAGACGGAACAATCTCCTTCTTCGATGAGAATGATCAACTTCAGACCGC
CTCCGTTCACTCTCTCGCCGCCGGTAAAAAAGTCATTCTCTTTGGTGTTCCTGGTGCTTTCACTCCCACTTGCAGCATGA
AGCATGTTCCTGGGTTCATTGAGAAAGCAGAGGAGCTTAAATCAAAGGGTGTTGATGACATCATTTGCTTTAGTGTGAAC
GATCCGTTTGTGATGAAAGCATGGGGAAAGACATACCCAGAGAACAAACATGTGAAGTTTGTAGCTGATGGGTCTGGAGA
ATACACACACCTTCTCGGACTTGAGCTTGACCTCAAGGACAAGGGTCTTGGTGTTAGGTCAAGGAGATTTGCTCTGTTGC
TTGATAACCTCAAGGTGACTGTAGCCAATGTCGAATCTGGTGGCGAGTTCACGGTTTCCAGCGCCGATGATATCCTCAAG
GCTCTCTAA

Species Parental gene accession Homology type Retrogenes number
Arabidopsis thaliana AT1G65980 ortholog_one2one 1 retrogene
retro_atha_13,
Glycine max GLYMA07G09240 ortholog_many2many 1 retrogene
retro_gmax_12,
Hordeum vulgare MLOC_12954 ortholog_one2many 1 retrogene
retro_hvul_9,
Populus trichocarpa POPTR_0018s09030 ortholog_many2many 1 retrogene
retro_ptri_12,
Prunus persica PRUPE_ppa012586mg ortholog_one2many 1 retrogene
retro_pper_22,
Sorghum bicolor Sb03g030950 ortholog_one2many 1 retrogene
retro_sbic_22,
Selaginella moellendorffii SELMODRAFT_159225 ortholog_many2many 1 retrogene
retro_smoe_4,
Solanum lycopersicum Solyc07g020860.2 ortholog_one2many 1 retrogene
retro_slyc_41,
Theobroma cacao TCM_028816 ortholog_one2many 1 retrogene
retro_tcac_8,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_alyr_5 60.37 99.38
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Download FASTA sequences of all fgenesh2_kg.2__836__AT1G65980.1 retrocopies