RetrogeneDB ID: | retro_chof_2394 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_70999:7258..7573(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SCOC | ||
Ensembl ID: | ENSCHOG00000000604 | ||
Aliases: | None | ||
Description: | short coiled-coil protein [Source:HGNC Symbol;Acc:20335] |
Percent Identity: | 56.19 % |
Parental protein coverage: | 66.45 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | RRLCGLRRQRCRCILVQVG-PEASYSESPPLPAPQAPXXSSGVLYLGPKSFL-RMMNADMDAVDAENQVE |
R...G.RRQ.C...LVQV..PEAS.....P...PQA...S..VL.L.PKS.L...MNA..D...A..QVE | |
Retrocopy | RQYKGGRRQSCP*LLVQVPWPEASSRPPFPVSVPQAADHSPKVLHLRPKSLLPKDMNANTDVTSAKDQVE |
Parental | LEEKTRLINQVLELQHTLEDLSARVDAVKEENLKL |
LEEKT.LINQVL.LQH.LEDLSA...A...ENLK. | |
Retrocopy | LEEKT*LINQVLRLQHPLEDLSAVTIAYIYENLKM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |