RetrogeneDB ID: | retro_mputfur_468 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896911.1:2732632..2732982(-) | ||
Located in intron of: | ENSMPUG00000007388 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SCOC | ||
Ensembl ID: | ENSMPUG00000016119 | ||
Aliases: | None | ||
Description: | short coiled-coil protein [Source:HGNC Symbol;Acc:20335] |
Percent Identity: | 51.24 % |
Parental protein coverage: | 73.75 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 1 |
Parental | GPEASIAFVLLPPPQFSVADHSSRILYPRP-ENLLPKMMNADMDAVDAENQVELEEKTR--LINQVLELQ |
GPE.S.....LP.P.....DHSSRILYPRP..N.LPK.MNA.MD..DAENQ.ELE.K.R..L.N...... | |
Retrocopy | GPEVSSWSISLPAPP--KGDHSSRILYPRP<QNVLPKTMNANMDTADAENQLELEDKARL*LVNC*NIST |
Parental | HTLEDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSKRK |
H....L..R.........K....N.....YIE.L.SASS.FQTT.TKSKRK | |
Retrocopy | HLKISLKSRCS*GRKSEAKIRKPNS*I-VYIEHLVSASSGFQTTYTKSKRK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |