RetrogeneDB ID: | retro_dord_634 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | scaffold_44384:1088..1373(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | Scoc | ||
Ensembl ID: | ENSDORG00000000177 | ||
Aliases: | None | ||
Description: | short coiled-coil protein [Source:MGI Symbol;Acc:MGI:1927654] |
Percent Identity: | 87.5 % |
Parental protein coverage: | 98.97 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | SSGFFCPRRSSVPRMMNADMDAVDAENQVELEEKTRLINQVLELQHTLEDLSARVDAVKEENLKLKSENQ |
SS.FFC.R.SSVPRMMNADMD..DAENQ.ELEEK.RL.NQVL.LQHTLEDLSARVD.VKEENLKLKSEN. | |
Retrocopy | SSRFFCSRHSSVPRMMNADMD-FDAENQMELEEKIRLTNQVLKLQHTLEDLSARVDVVKEENLKLKSEN* |
Parental | VLGQYIENLMSASSVFQTTDTKSKRK |
VLGQYIENLMSASSVFQTTD.KSKRK | |
Retrocopy | VLGQYIENLMSASSVFQTTDMKSKRK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |