RetrogeneDB ID: | retro_nleu_1830 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397312.1:10997111..10997405(+) | ||
Located in intron of: | ENSNLEG00000013686 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SCOC | ||
Ensembl ID: | ENSNLEG00000005081 | ||
Aliases: | None | ||
Description: | short coiled-coil protein [Source:HGNC Symbol;Acc:20335] |
Percent Identity: | 80.61 % |
Parental protein coverage: | 52.72 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | HSSRILYPRPKSLLPKMMNADMD-VDAENQVELEEKTRLINQVLELQHTLEDLSARVDAVKEENLKLKSE |
HSSR.LYPRPKSLLPKM.N..MD.VDAEN..ELE..T.LINQVLELQH.LEDL..R.D.V.EENLKLKSE | |
Retrocopy | HSSRFLYPRPKSLLPKMTNIHMDAVDAENHLELEGNTQLINQVLELQHILEDLPVRGDTVTEENLKLKSE |
Parental | NQVLGQYIENLMSASSVFQTTDTKSKRK |
NQVLG.Y.EN.MSASSVFQTTDTKSKRK | |
Retrocopy | NQVLG*YTENFMSASSVFQTTDTKSKRK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |