RetrogeneDB ID: | retro_etel_2195 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_95745:5165..5761(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000000337 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 62.19 % |
Parental protein coverage: | 72.2 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | MACARPLISVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTG |
.AC..PLISVY.EK.ES.GK....P.VFKA.I..DI.NFVHTNLRKN.R.P.AVSELA.HQTSA.SW... | |
Retrocopy | IACTLPLISVYCEKIESCGKDIAFPDVFKASIQLDIMNFVHTNLRKNKRLPHAVSELARHQTSAASWSST |
Parental | RAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSK |
.AVARI.RV....TH.SGQGA.GN.C.G..MFAPTK.W.RWH.RVNT..K.Y.I.S.L.AS.LP.LVMSK | |
Retrocopy | *AVARISRVQDSRTHCSGQGALGNICCGRCMFAPTKIWSRWHQRVNTM*KCYTIWSYLIASTLPVLVMSK |
Parental | GHRIEEVPELPLVVEDKVEGYK-KTKEAVLLLKKLKAWNDIKKVYFSRRIGAGKGKIEEYR |
GH...EVPELP..V.DK..GY..K.K..V.LL.KLK.WNDI.KVY.S....A.K.K..... | |
Retrocopy | GHCTGEVPELPFAVKDKILGYR<KAKGVVVLLEKLKTWNDI-KVYASQ*LRACKAKMRTHQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |