RetrogeneDB ID: | retro_etel_226 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_3835:28732..29204(+) | ||
Located in intron of: | ENSETEG00000002869 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000000337 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 66.26 % |
Parental protein coverage: | 57.4 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 4 |
Parental | TQKRYAICSALAASALPALVMSKGHRIEEVPELPLV-VEDKVEGYKKTKEAVLLLKKLKAWNDIKKVY-F |
..K.YAIC.ALA.S.L.ALV.SKGH.IEEVPEL.LV...DKV.GYKKTKEAVLLLKK..AWNDIKK.Y.F | |
Retrocopy | SEKPYAICAALATSTLLALVLSKGHHIEEVPELRLV>AKDKVQGYKKTKEAVLLLKKRMAWNDIKKDY<F |
Parental | SRRIGAGK-GKIEEYRYTQQGDH-CIIYNEDNGIVKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWT |
S.....GK.GK.....YT....H.CIIYN..NGI.KA.R..PGITLLNVSKL.I.KL.PGGHVG.FC.WT | |
Retrocopy | SEPMKSGK<GKMRK-PYTSARVH<CIIYNDNNGIIKASRIFPGITLLNVSKLDI*KLPPGGHVGYFCVWT |
Parental | EGAFHKLDELYGTWRKAASLKSN |
.....KL..LYGTW.KA.SL.SN | |
Retrocopy | KDDVRKLHKLYGTWSKATSLTSN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |