RetrogeneDB ID: | retro_mgal_1 | ||
Retrocopylocation | Organism: | Turkey (Meleagris gallopavo) | |
Coordinates: | 1:44127039..44128752(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMGAG00000015696 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | GALNT12 | ||
Ensembl ID: | ENSMGAG00000007244 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 62.91 % |
Parental protein coverage: | 99.57 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | CKEKKYDYYSLPKTSVVIAFYNEAWSTLLRTVHSVLETSPDILLEEVILVDDYSDKDHLKEPLENYVAGL |
CK.K.Y.Y..LP.TSVVIAFYNEAWSTLLRTVHSVLETSP..LL.E.ILVDD.SDK..LK..LE.Y...L | |
Retrocopy | CKTKSYNYRKLPTTSVVIAFYNEAWSTLLRTVHSVLETSPSVLLKEIILVDDLSDKVYLKTDLEKYISSL |
Parental | RKVRLIRANKREGLVRARLLGASVAKGDILTFLDCHCECHEGWLEPLLERTIRIAEEESAVVCPVIDVID |
..VRLIR.NKREGLVRARL.GA..A.GD.LTFLDCHCEC..GWLEPLLE...RIAE.E..V.CPVID.ID | |
Retrocopy | KRVRLIRTNKREGLVRARLIGATFATGDVLTFLDCHCECVSGWLEPLLE---RIAENETVVICPVIDTID |
Parental | WNTFEYLGNAGEPQIGGFDWRLVFTWHTTPEREQKRRKSKIDVIRSPTMAGGLFSVSKKYFDYLGSYDTG |
WNTFEY.....EP.IGGFDWRL.F.WH..P..E..RRKS..D.IRSPTMAGGLF.VSKKYF.YLG.YDTG | |
Retrocopy | WNTFEYYMQSAEPMIGGFDWRLTFQWHSVPKHERLRRKSETDPIRSPTMAGGLFAVSKKYFEYLGTYDTG |
Parental | MEVWGGENLEFSFRIWQCGGSLEIHPCSHVGHVFPKQAPYSRSKALANSVRAAEVWMDEYKELYYHRNPH |
M.VWGGENLE.SFR.WQCGG.LEIHPCSHVGHVFPK.APY.R...L.N..RAAEVWMDEYKE..Y.RNP. | |
Retrocopy | MDVWGGENLELSFRVWQCGGMLEIHPCSHVGHVFPKRAPYARPNFLQNTARAAEVWMDEYKEHFYNRNPP |
Parental | ARLEPYGDVTERRLLREKLKCKDFKWFLENVYPELHVPEDRPGFFGMLKNRGMANFCFDYNPPNEHEITG |
AR.E.YGD..ER.LLRE.LKCK.F.W.L.NV..ELHVPEDRPG..G.....G....C.DY..P.EH..TG | |
Retrocopy | ARKENYGDISERKLLRERLKCKSFNWYLRNVFSELHVPEDRPGWHGAVRSVGISSECLDYVLP-EHNPTG |
Parental | HRVILYPCHGMGQNQFFEYTSHNEIRYNTRQPEACAAVIAGTEYLTMNLCQENIHHVPENQKFAFREDGT |
....L..CHG.G.NQFFEYTS..E.R.N....E.CA.V........M..C......VPE.....F.EDGT | |
Retrocopy | AHLSLFGCHGQGGNQFFEYTSNKEFRFNS-VTELCAEVPEQEDFIGMRSCPKDGSPVPEIIIWHFKEDGT |
Parental | LFHMQTQKCLQAESNSYNGNPAPVLRPCSNSD-YQKWFFKE |
..H....KCL.A......G......R.C...D..Q.W.F.. | |
Retrocopy | IYHPHSGKCLTAYRTA-EGRADVEMRTCNAADKNQMWKFEK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |