Parental gene:

GALNT12, ENSPSIG00000017246

Aliases:None
Description:UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12) [Source:HGNC Symbol;Acc:19877]
Organism:Chinese softshell turtle (Pelodiscus sinensis)
Coordinates:JH212936.1:3424628..3494912(+)


>ENSPSIG00000017246
CTGGCCGCAAGTGGTGGGGCCGGCGGGGCCCGCGGAGCCCCCCAGCCACCGCTGCCCGCGGAACCCGAGCGCCTGCGGAG
ACCCGTGTACGAGAAGCCGCCCCTGGAGCCCGGGGCGCTGGGCGAGCTGGGCCAGGCGGTGCGGCTGCAGCTGAGCCAGG
CAGAGAAGAGCCTCCAGGAAGCGAGTATCCAGCAGCACCAGATCAACATCTACCTGAGCGACCGCATCTCCCTGCACCGC
CGCCTGCCCGAGCGCTGGCACCCGCTGTGCAAGGAGAAAAAATATGATTATAATAACCTGCCAAAAACTTCGGTTGTAAT
AGCTTTTTATAATGAGGCTTGGTCAACACTTCTGCGAACAGTTCATAGTGTTCTTGAGACATCCCCAGATATTCTGCTGG
AAGAAGTTATCCTTGTGGATGATTATAGTGACAAAGAACATTTAAAGAAACCCTTGGAAAGTTATGTGGCTGGTTTACGC
AAGGTACGTCTTATTCGTGCAAATAAAAGAGAAGGTCTGGTTCGAGCTCGGCTGCTGGGAGCTTCCCTGGCGAAAGGAGA
TGTTTTGACATTTCTTGATTGCCACTGTGAGTGCCATGAAGGATGGCTTGAACCACTATTGGAAAGAATTGGTGAAGAGG
AGTCGGCAGTTGTGTGCCCTGTGATCGATGTGATTGAATGGAATACATTTGAGTACTTGGGAAATTCTGGGGAACCACAG
ATTGGAGGCTTTGACTGGAGACTGGTCTTCACTTGGCATGTTATCCCAGAGAAAGAGCAAAAACGAAGAAGGTCCAGAAC
TGATGTAATCAGATCTCCAACCATGGCTGGTGGATTGTTTGCTGTCAGCAAGAAATATTTTGACTATCTTGGCTCTTATG
ACACAGGAATGGAAGTATGGGGAGGAGAAAACCTTGAATTCTCATTTAGGATCTGGCAGTGCGGAGGAAGTCTTGAGATC
CACCCCTGTTCTCATGTAGGCCACGTTTTCCCAAAACAAGCTCCCTACTCGCGGGCCAAGGCCCTGGCTAACAGTGTGCG
TGCTGCAGAAGTTTGGATGGACGAATACAAAGAGCTTTATTACCACCGAAATCCACATGCACGTTTGGAGCCTTATGGAG
ATGTGACAGAAAGAAGGCTGCTTCGAGAGAAGCTTAAATGTAAAGATTTCAAGTGGTTCTTGGAGAATATTTACCCTGAA
CTTCATGTACCTGAAGACAGAGCTGGCTTCTATGGAATGCTGAAAAATAGAGGAATGGAAAATCACTGCTTTGATTACAA
CCCTCCAAATGAGCATGAAGTAACAGGGCACAGAATCATATTATATCCATGTCATGGCATGGGACAAAATCAGTTTTTCG
AATATACATCCCATAATGAAATACGTTACAATACTCGGCAGCCTGAAGCCTGTGCAGCAGTTGATTCTGGGACTGACTAT
TTGACAATGTACTTGTGTCAAGACAATATTCAAAATATTCCTGAAAATCAAAAATTTGTTTTCAGAGAGGATGGTACTTT
GTTCCATGTACAAACCCAGAAGTGTCTGCAAGCTGAATCTAACTCTTACAATGGCAATCCAGCACCGTTATTGCGACCAT
GTAGCAATTCAGAATACCAAAAATGGTTCTTCAAAGAAAGAAGTTGA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000002302 ortholog_one2one 1 retrogene
Ailuropoda melanoleuca ENSAMEG00000004520 ortholog_one2one 1 retrogene
Anas platyrhynchos ENSAPLG00000012197 ortholog_one2one 1 retrogene
Bos taurus ENSBTAG00000009037 ortholog_one2one 1 retrogene
Canis familiaris ENSCAFG00000002494 ortholog_one2one 1 retrogene
Cavia porcellus ENSCPOG00000012418 ortholog_one2one 1 retrogene
Equus caballus ENSECAG00000016546 ortholog_one2one 1 retrogene
Ficedula albicollis ENSFALG00000005188 ortholog_one2one 1 retrogene
Felis catus ENSFCAG00000008831 ortholog_one2one 1 retrogene
Gorilla gorilla ENSGGOG00000005792 ortholog_one2one 1 retrogene
Loxodonta africana ENSLAFG00000022011 ortholog_one2one 1 retrogene
Meleagris gallopavo ENSMGAG00000007244 ortholog_one2one 1 retrogene
Microcebus murinus ENSMICG00000011075 ortholog_one2one 1 retrogene
Myotis lucifugus ENSMLUG00000002630 ortholog_one2one 1 retrogene
Macaca mulatta ENSMMUG00000019561 ortholog_one2one 1 retrogene
Mustela putorius furo ENSMPUG00000006502 ortholog_one2one 1 retrogene
Mus musculus ENSMUSG00000039774 ortholog_one2one 1 retrogene
Nomascus leucogenys ENSNLEG00000017019 ortholog_one2one 1 retrogene
Oryctolagus cuniculus ENSOCUG00000016221 ortholog_one2one 1 retrogene
Otolemur garnettii ENSOGAG00000001408 ortholog_one2one 2 retrogenes
Ochotona princeps ENSOPRG00000006029 ortholog_one2one 2 retrogenes
Procavia capensis ENSPCAG00000005068 ortholog_one2one 1 retrogene
Pongo abelii ENSPPYG00000019437 ortholog_one2one 1 retrogene
Pan troglodytes ENSPTRG00000021180 ortholog_one2one 1 retrogene
Pteropus vampyrus ENSPVAG00000008774 ortholog_one2one 1 retrogene
Rattus norvegicus ENSRNOG00000008099 ortholog_one2one 3 retrogenes
Sarcophilus harrisii ENSSHAG00000017474 ortholog_one2one 1 retrogene
Sus scrofa ENSSSCG00000005379 ortholog_one2one 1 retrogene
Ictidomys tridecemlineatus ENSSTOG00000021306 ortholog_one2one 1 retrogene
Tupaia belangeri ENSTBEG00000003627 ortholog_one2one 1 retrogene
Tarsius syrichta ENSTSYG00000004975 ortholog_one2one 1 retrogene
Tursiops truncatus ENSTTRG00000010848 ortholog_one2one 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_psin_1 59.56 99.45
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Download FASTA sequences of all ENSPSIG00000017246 retrocopies