RetrogeneDB ID: | retro_mgal_8 | ||
Retrocopylocation | Organism: | Turkey (Meleagris gallopavo) | |
Coordinates: | 25:3276910..3277372(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMGAG00000002765 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMGAG00000000739 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 66.67 % |
Parental protein coverage: | 76.88 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | SCQDAPTSEELEQFAKDLKHKRIMLGFTQADVGLALGTLYGKMFSQTTICRFEALQLSFKNMCKLKPLLQ |
S..DAP.S..LEQFAK..K..RI.LGFTQADVGLALGTLYG..FSQTTICRFEALQLSFKNMCKLKPLL. | |
Retrocopy | SDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLN |
Parental | RWLNEAENTDNMQEMCNAEQVLAQARKRKRRTSIETNVKGTLESFFRKCVKPSPQEISQIAEDLNLDKDV |
.WL.E...........N.....AQ.RKRK.RTSIE..VKG.LE..F.KC.KPS..EI...A..L.L.K.V | |
Retrocopy | KWLEETDSSTG--SPTNLDKIAAQGRKRKKRTSIEVGVKGALENHFLKCPKPSAHEITSLADSLQLEKEV |
Parental | VRVWFCNRRQKGK |
VRVWFCNRRQK.K | |
Retrocopy | VRVWFCNRRQKEK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000010377 | 3 retrocopies | |
Bos taurus | ENSBTAG00000021111 | 2 retrocopies | |
Callithrix jacchus | ENSCJAG00000019789 | 1 retrocopy | |
Dipodomys ordii | ENSDORG00000009549 | 1 retrocopy | |
Gallus gallus | ENSGALG00000026574 | 1 retrocopy | |
Meleagris gallopavo | ENSMGAG00000000739 | 1 retrocopy |
retro_mgal_8 ,
|
Mustela putorius furo | ENSMPUG00000001202 | 2 retrocopies | |
Mus musculus | ENSMUSG00000024406 | 2 retrocopies | |
Oryctolagus cuniculus | ENSOCUG00000017160 | 3 retrocopies | |
Ictidomys tridecemlineatus | ENSSTOG00000026103 | 3 retrocopies | |
Taeniopygia guttata | ENSTGUG00000002412 | 1 retrocopy |