RetrogeneDB ID: | retro_amel_1057 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192870.1:695898..696558(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSAMEG00000010377 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 81.78 % |
Parental protein coverage: | 59.33 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | EPGWDDPLTWLSFSGPPSGLAIGPVVGLGAEVWGIPPCPPPYEFCGGMAYCAPQVGVGLVPQGGLETSQP |
EPGWDDPLTWLSFSGPPSGLAIGPVVGLGAEVWGIPPCPPPY.FCGGMAYC.PQ.GVGLVPQG.LETSQ. | |
Retrocopy | EPGWDDPLTWLSFSGPPSGLAIGPVVGLGAEVWGIPPCPPPYDFCGGMAYCGPQIGVGLVPQGSLETSQH |
Parental | EGERGAGV---ESNSEGASPEP-CAAPPGAVKPDKEKLEQNPEESQDIKALQKDLEQFAKLLKQKRITLG |
EGE...G.........G..P.P.CAA.PGAVKPDKEKLEQNPEESQDIKALQKDLEQFA.LLKQKRI.LG | |
Retrocopy | EGEWESGEPRWRATPRGPPPSP<CAASPGAVKPDKEKLEQNPEESQDIKALQKDLEQFARLLKQKRIALG |
Parental | --YTQADVGLTLGVLFGKVFSQTTIC----RFEALQLSFKNMCKLRPL-LQKWVEEADNNENLQEICKAE |
..YTQADVGLTLGVL.GKVFSQT.IC....RFEALQLSF.N.CKLRP..LQK.VEEAD.NENLQEI.KAE | |
Retrocopy | YRYTQADVGLTLGVLSGKVFSQTSICPRICRFEALQLSFENTCKLRPR<LQKQVEEAD-NENLQEIGKAE |
Parental | TLVQA-RKRKRTSIE |
TLVQA..KRKRTSIE | |
Retrocopy | TLVQA<LKRKRTSIE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |