RetrogeneDB ID: | retro_dord_65 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | GeneScaffold_1861:83002..83680(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSDORG00000009549 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 54.19 % |
Parental protein coverage: | 62.67 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | VSQDSKDLQQELEQFAKLLKQKRITLGYTQADVGLTLGVLFGKVFSQTTICRFEALQLSFKNMCKLRPLL |
V..D......E.EQ.AK.L.QKR.TLGY.QADVG...G..FGKV.SQTTICRFEA.QLS..NM.KLRPLL | |
Retrocopy | VPEDVSAIEKEMEQLAKELRQKRLTLGYSQADVGFAVGAMFGKVLSQTTICRFEAQQLSLANMWKLRPLL |
Parental | QKWVEEADNNENLQEICKAETLV-QARKRKRTSIENRVRGNLESMFLQCPKPTLQQINIIAQQLGLEKDV |
..W.EE.D...NL...CK......Q.RKR.R.S.E.R...NLE..FLQCPKPT.QQI..IA..L.L.KD. | |
Retrocopy | KMWLEEVD-EKNLLGLCKMDMILQQGRKRRRASRERRIGINLEKLFLQCPKPTPQQISRIAGHLRLQKDL |
Parental | VRVWFCNRRQKGKRSSSDYSQREDFEAAGPPFPGGPVAFPLAPGPHFGTPGYGTPHFATLY-SVPFSEAE |
V.VWF.NR.Q.G.....D.S.RE...AA.PP.PG.P..FPLAPG.HF....YG.P....LY.S..F.... | |
Retrocopy | VQVWFYNRSQMGSWPTTDVSLRENVGAARPPLPGPPMCFPLAPGFHFDFHHYGGPCLTPLYSSTHFPAGG |
Parental | AFPPVPVTTLGSPMHSN |
.....P.TTLG.P..S. | |
Retrocopy | TLLSAPATTLGLPRLSS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |