RetrogeneDB ID: | retro_mluc_712 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429772:10662682..10663113(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBE2E2 | ||
Ensembl ID: | ENSMLUG00000025144 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 80.82 % |
Parental protein coverage: | 72.14 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | AKRIQKELAEITLDPPPNCSAGPK-GDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRT |
.KRI.KELA..TLDPP.NCSA.PK.GDNIYEWRSTIL.PP.SVYEGGVFFLD.TF.P..PF..PKVTF.T | |
Retrocopy | SKRIRKELADSTLDPPANCSASPK<GDNIYEWRSTILEPPASVYEGGVFFLDTTFTPEHPFNLPKVTFQT |
Parental | RIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQW |
RIYH.N.NSQGVI.LDILKDNWSPAL.ISK.L.S.CSLLTDCNPAD..V.SIATQYM.NRAEHDRMA.QW | |
Retrocopy | RIYHWN-NSQGVIGLDILKDNWSPALSISKALHSTCSLLTDCNPADL*VRSIATQYMINRAEHDRMAEQW |
Parental | TKRYAT |
TKRYAT | |
Retrocopy | TKRYAT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000010341 | 2 retrocopies | |
Ciona intestinalis | ENSCING00000006860 | 1 retrocopy | |
Dasypus novemcinctus | ENSDNOG00000005448 | 7 retrocopies | |
Felis catus | ENSFCAG00000007748 | 2 retrocopies | |
Microcebus murinus | ENSMICG00000016799 | 3 retrocopies | |
Myotis lucifugus | ENSMLUG00000001547 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000005710 | 13 retrocopies | |
Myotis lucifugus | ENSMLUG00000011919 | 3 retrocopies | |
Myotis lucifugus | ENSMLUG00000025144 | 1 retrocopy |
retro_mluc_712 ,
|
Ochotona princeps | ENSOPRG00000010615 | 2 retrocopies | |
Tursiops truncatus | ENSTTRG00000005156 | 1 retrocopy | |
Vicugna pacos | ENSVPAG00000007007 | 3 retrocopies |