RetrogeneDB ID: | retro_chof_1304 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_255789:1078..1699(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBE2E2 | ||
Ensembl ID: | ENSCHOG00000010341 | ||
Aliases: | None | ||
Description: | ubiquitin-conjugating enzyme E2E 2 [Source:HGNC Symbol;Acc:12478] |
Percent Identity: | 74.88 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | LSTEAQRVD-VSPSTSGGSSDGDQRESVQLEPE-REQVQP----KKKEGKISSKTAAKLSTSAKXXXXXX |
.S...QR.D..SPSTS.GSSD.DQR.....EPE..E...P.....KK..K..SKT.AKLSTSAK...... | |
Retrocopy | MSSDRQRSDDESPSTSSGSSDADQRDPAAPEPEEQEERKPSAPQQKKNTKLFSKTTAKLSTSAKTIQKEL |
Parental | XXXXXXXXXXXXAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINS |
............AGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFS..YPFKPPKVTF.TRIYHCNINS | |
Retrocopy | AEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSNYPFKPPKVTFCTRIYHCNINS |
Parental | QGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT |
QGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQY.TNRAEHDR.ARQWTKRYAT | |
Retrocopy | QGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKRYAT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |