RetrogeneDB ID: | retro_mluc_594 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429769:7431290..7431728(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBE2D4 | ||
Ensembl ID: | ENSMLUG00000011919 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 93.84 % |
Parental protein coverage: | 99.32 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | AWKRIKKELSDLQRDPPAQWSARPVGDDWFCWQATITGPNDSPYQGGIFFLNIHFPTDYPFKPPKVAFTT |
A.KRIKKELSDLQRDPPAQWSARPVGDD.FC.QATITGPNDSPYQGGIFFLNIHFPTDY.FKP.KVAFTT | |
Retrocopy | ALKRIKKELSDLQRDPPAQWSARPVGDDRFCRQATITGPNDSPYQGGIFFLNIHFPTDYLFKPSKVAFTT |
Parental | KIYHPNIHSNGSICLDVLQSHWSPSLTVSEVLLSICSLLCEPNPDDPLVPEIAHTYKANREKYNKLAREW |
KIYHPNIHSN.SICLDVLQSHWSPSLTVSEVLLS.CSLLCEPNPDDPLVPEIAHTYKAN.EKYNKLAREW | |
Retrocopy | KIYHPNIHSNHSICLDVLQSHWSPSLTVSEVLLSMCSLLCEPNPDDPLVPEIAHTYKAN*EKYNKLAREW |
Parental | TQKYAM |
TQKYA. | |
Retrocopy | TQKYAI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000003997 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000007875 | 4 retrocopies | |
Dipodomys ordii | ENSDORG00000006888 | 5 retrocopies | |
Homo sapiens | ENSG00000078967 | 2 retrocopies | |
Gorilla gorilla | ENSGGOG00000003378 | 3 retrocopies | |
Myotis lucifugus | ENSMLUG00000001547 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000005710 | 13 retrocopies | |
Myotis lucifugus | ENSMLUG00000011919 | 3 retrocopies |
retro_mluc_1826, retro_mluc_1827, retro_mluc_594 ,
|
Myotis lucifugus | ENSMLUG00000025144 | 1 retrocopy | |
Macaca mulatta | ENSMMUG00000002410 | 5 retrocopies | |
Nomascus leucogenys | ENSNLEG00000003364 | 3 retrocopies | |
Oryctolagus cuniculus | ENSOCUG00000008900 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000029727 | 1 retrocopy | |
Sus scrofa | ENSSSCG00000016722 | 2 retrocopies | |
Tupaia belangeri | ENSTBEG00000003691 | 9 retrocopies | |
Tarsius syrichta | ENSTSYG00000000595 | 14 retrocopies |