RetrogeneDB ID: | retro_mputfur_1100 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL897015.1:2354610..2355203(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMPUG00000015547 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 59.51 % |
Parental protein coverage: | 73.61 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 6 |
Parental | EDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIID-FFLGASLKDEVLKIMPVQKQTRAGQRTRF |
EDK..IP.TKLG.LVKDMKI.SLE.I.L.SLPI.ESEIID.FF.GAS....VLK..PVQKQT.AG..TRF | |
Retrocopy | EDKKGIPNTKLGCLVKDMKITSLEGISLSSLPIRESEIID<FFPGASFRNGVLKPLPVQKQTHAG*QTRF |
Parental | KAFVAIGDYN-GHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIG-KPHTVPCKVTGRCGSVL |
KAF.A..D...GHVG.G..CSKEV.TA...A.ILA......VRRGYWGNK....PH.VPCK.TG.CGS.. | |
Retrocopy | KAFFALEDDH>GHVGPGGGCSKEVVTATGRAMILATSFQHLVRRGYWGNKTD<QPHSVPCKMTGCCGSPC |
Parental | VRL-IPAPRGTGI-VSAPVPKKLLMMAGI-DDCYTSARGCTATLGNFAKATF-DAISKTYSYLTP |
.....P.P......VSAPVPK.L.M.A....D...SAR..T..LGNF.KAT..D.I.KT.S.L.P | |
Retrocopy | ESISSPPPEALAL<VSAPVPKRLQMTAHL<EDSCPSARDSTVPLGNFIKATL<DTIPKTHSCLSP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Anolis carolinensis | ENSACAG00000002549 | 1 retrocopy | |
Bos taurus | ENSBTAG00000009535 | 7 retrocopies | |
Loxodonta africana | ENSLAFG00000004696 | 11 retrocopies | |
Macropus eugenii | ENSMEUG00000004508 | 2 retrocopies | |
Myotis lucifugus | ENSMLUG00000011660 | 1 retrocopy | |
Monodelphis domestica | ENSMODG00000016077 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000015547 | 11 retrocopies | |
Procavia capensis | ENSPCAG00000002090 | 2 retrocopies | |
Sarcophilus harrisii | ENSSHAG00000015213 | 5 retrocopies | |
Tursiops truncatus | ENSTTRG00000011393 | 12 retrocopies | |
Vicugna pacos | ENSVPAG00000006867 | 6 retrocopies |